Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241806g00008 ATGCCTCACCCAAGGTTTCTTAAGTTTTATGCTCCTTGGGATCGAAGACAGTCGAATGTGTACATTCCCACAACCCTGGAGCCGTTTTCTGCTAAACTCAGGTATTTGGAATGGAATAGTTATCCTCTGAATTCTCTACCATCAAGATTCTGTGCAGAAAAGCTTGTTGAAATTAGGATGCCTTACAGTGAAATTTCTAAACTCTGGGATGGAAAGCAGGATCTAGAGAATTTGACAGTGCTTGACCTTCGTGGATGTATAAAGTTGGTAGAGCTTCCAGATTTCGGTAAAGCAACAAAGCTTAAAACCATATACCTTTGCTATTGTGAAAAACTATGTCAACTTCATCCATCTATTTTATACATCCAAACACTTGAGCAATTGCATCTTAATGGTTGCAAAGAATTGAAGAGTGTCAAAGGCAATTGGAAGTCTCTTAAAGGACTTTATGCTACGAACTGTTCAAGCCTGGAGGAGTTTTCAGTGTCTTCAGAGAAACTGAGGAACTTGTGTCTCTGTCGGTCGAGAATTAAGAGTCTCCCAAATGAATTCTGCTGCTTAACATCTCTTAAGCAAATTTGTCTTTGTAATTGCACAGAGCTAATTGAGCTCCCAGACAACATTAAAGCCTTATCAAGGTTAACAACTCTCGAAGTAAGTGGTTGTTGTGGCCTTCGATGTATACCAGAGCTTCCACCATCTATTGAAGAGTTTCGTGCCGTTGGTTGCACATCACTGGAAAGAGTATTCAGTTTGAAGGCAGTATTTAGTTTGAATAGGAGAAAGATCTCATTTGTAAATTGCAAGAGATTGGAAGAGGAGTCAGTGAATGATATTATGGAAGATGCACATCTCACAATATGCAGAAACATTTTGTTGTGGTCAGAAGATCGATACCTGATGAATTATGATCATTATCTTGACATGGAAGGTCGTGTTTGTTATCCTCATTATCTTGACATGGTAGGTCATGTTTGTTATCCAGGGTACAAAGTTCCAAAGTGGTTCAGATTTCAGGCAGAAGAAGCATCCATATCTCGTGATTATTTTGATGAATGGGGTGGTGTCGGTATCAAGTGTGAATACAGCATCATGGGAGATGGTCTAAAGCACATGTTTGTCCATAAAGAGCAATGTGTTGTTCCTGAAAGACGATGGATTTCTGATCACGTTTTTATATGGACTGATATACATGGTAGTTATTATATATTAAGTAAAATTAATAGTTTCATAGGCAATGATGATGATGATGAAAGCCCTTGCAACCAAAAGATCTCATTCAGGTTCATTGCTGATAGGCAGAAATCAGGAGAAAGGCAAGAATATGAAGATTCTTTCATCAAAGGGTGTGGGGTTTTTCCAATGTATGACTCTGCTCTCGTGGATGCCATTCAGAATATTCAGTTGGAATTTGAGCTGAACCCTCATCATAACTCCATCCCAAGGGTGAATCTTGACTCTTTCAAAAATGAGATGATCCGGAGGTGTACAGGAAAATCAAAACTCCGACATGATAGTTGTTGGTTGTGCCAAGAACTTCGGAGGTTTCTTGATTTAGGGTTCAGTGATTTGGTGCCTAGGATATAA 1587 0.3913 MPHPRFLKFYAPWDRRQSNVYIPTTLEPFSAKLRYLEWNSYPLNSLPSRFCAEKLVEIRMPYSEISKLWDGKQDLENLTVLDLRGCIKLVELPDFGKATKLKTIYLCYCEKLCQLHPSILYIQTLEQLHLNGCKELKSVKGNWKSLKGLYATNCSSLEEFSVSSEKLRNLCLCRSRIKSLPNEFCCLTSLKQICLCNCTELIELPDNIKALSRLTTLEVSGCCGLRCIPELPPSIEEFRAVGCTSLERVFSLKAVFSLNRRKISFVNCKRLEEESVNDIMEDAHLTICRNILLWSEDRYLMNYDHYLDMEGRVCYPHYLDMVGHVCYPGYKVPKWFRFQAEEASISRDYFDEWGGVGIKCEYSIMGDGLKHMFVHKEQCVVPERRWISDHVFIWTDIHGSYYILSKINSFIGNDDDDESPCNQKISFRFIADRQKSGERQEYEDSFIKGCGVFPMYDSALVDAIQNIQLEFELNPHHNSIPRVNLDSFKNEMIRRCTGKSKLRHDSCWLCQELRRFLDLGFSDLVPRI 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241806g00008 528 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 161 IPR044974 GO:0006952
Stsc241806g00008 528 Gene3D Ribonuclease Inhibitor 157 302 IPR032675 -
Stsc241806g00008 528 SUPERFAMILY L domain-like 24 277 - -
Stsc241806g00008 528 Gene3D Ribonuclease Inhibitor 17 156 IPR032675 -
Stsc241806g00008 528 Pfam Leucine Rich Repeat 54 73 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241806g00008 Stsc-Chr241806 41528 43277 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241806g00008 1 287 WRKY Transcription Factor Family AT5G45050 31.454 6.10e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241806g00008 - - aip:107626076 598.971