Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241806g00006 ATGGCAGCTTCTTCTTCTTCCTCTGCCTCATCTTCTAATTCTTTCAATTTTCCTGAAATCAAATATGATGTCTTCATCAGTTTCAGAGGAGAAGACATCCGCACTAATTTTCTTAGCCATTTGAGAAAAGAATTGCGTCGTAACCAAATCGATTTCTTTCTTGATGATGAAAAGCTTCATCCTGGAAATGAGATTTCATCCACACTCCTTCGAGCAATTGAGCAATCATATGTTTCATTGGTCATCTTCTCGGAGCACTATGCTTCTTCGAGATGGTGTATGGAGGAGCTTGTCAAGATTATTCAATGCATGAAACAATATCAAAGGATTGTCATACCTGTCTTTTACAATATTGATCCTTCTGATGTAAGGCGTCAAAAAGGAACTTTTGCAGAGGCTTTTGATCTCCACAAAGAGAAATATGAGCAGGAAAACATGCAAAGGTGGAGATCGGTTTTGAAGGAGACAGCAAATTTATGTGGAATTCATTATCCATCCAAATATGGAAATGAAGCAGAACTCATCGAAGATATTGTGAAAGTAATTTCGAAGAAATTATCACATCCATTTTCGTATGCACCCGAAGACTATATCGGAATTAATGAAAATTTTAGATTTCTTCAACCTTTACTGGCAATGGAGTCTAATGAAGTTCGATATGTGGGAATCTGGGGGATGGGAGGCATAGGTAAAACAACAATTGCTAGAGCAATATATGCCAGATATGCCTCTCAATTCGAAGGGTGCTGTTTTCTAGAAAATGCAACAGAAAAATGGCACAAGTCTAGTCTACTTTGCTTATATGAGGAAGTTGTTTCTGAACTACTTGAAGGAGAACATCTCCTTGTGAAGGGATCAGCCCAGGCAAGATTTGAGTATGTCAAGAGAAGGTTGAATCGGAAAAAGGTTCTCATAGTATTTGACAGTGTGGATGCATTTGAGATGTTAGATTTTCCAAACAGAAATCAAATCTTCTTGGCACCAGGTAGTAGGGTTATTGTAACATCTAGAGACATGCAAATACTAATTGCTGCAAGAGTTCATGCAATATATGAGGTCCGGGGATTGAGTTTTAGAAGTTCTCTTAAGCTTTTTTGCTTAAATGCCTTTGACAAAATCTATCCTGAAAATGGATATGAAAAGCTTTCAGCAATGGCAGTTGAATATGCAAAAGGCATTCCATTAGCCTTAAAATTGTTGGGTTCCTTTCTACGCCTAAGAAGTGGAGAAGCATGGAGAAGTGAACTAGCAAAACTCAAGGCTCATCCTGATTCCAGCATTTTCAATGTGTTAAAGTTGAGTTATGAGGGTTTAGATGATTCAGACAAGAGCATATTTCTAGACATTGCATTCTTTTTCAAGGGAAAAGACAAGGATTATGTCATAAAGTTTGCAGACTCTTGTGGTTTCTATGGAGGCATCGGAATAGACAACCTCCATCGTAAGGCTCTTATAACTATTTCAAGGTACAACACAATAAAAATGCATGATCTGATACAGCAAATGGGTTTGGAAATTGTTTACAAGGAATCACCCAAGGACCTCAAAAAGCGTAGCCGACTGAGGAATCCTGAGGATGTCAGGAATGTATTGGAAAATAGTGAGGGAGAAAAGTCAGTTGAAGGCATCATGTGTGACTTGTCTCGAATTGGAGATGTACACTTGAATAAGGACACCTTTAAAAATATGCCTCACCTAAGGTTTCTTAAGCTTTATGCTCCTCAGGATAAAAGACCGTCAAATAATGTGTATGTTCCCACAACCCTGGAGCCGTTTTCTGCGAAACTCAGGTATTTGGAGTGGAATGGTTATCCTTTGAATTCTCTACCATCAAGGTTTTGTGCGGAGAAGCTTGTTGAGCTTAGGATGCCCAACAGTCAAATTTCTAAACTCTGGGATGGAATAAAGAATCTTCCAAATTTGACAGTGCTTGACCTTAATGGATGTAAAAAGTTGGTAGAGCTTCCAGATTTGAGTCAAGCAACAAAGCTTAAAAGCATAAACCTTAAGGAGTGTGAAAGCCTATGTCAACTTCATCCATCTATTTCATACATCCGAACACTTGAATATTTGGATATTTATGGTTGCAAACAATTGAAGAGTCTCAAAGGCAATTTTAAGTCTCCTAAAGCACTTCATGCTGGTAATTGTTCAAGCCTGGAGGAATTTTCAGTGTCTTCGTCAGAGGAACTGAGGACATTGAATTTGTCTTCGTCGAGAATTAAGAATCTTCCAAATGAGTTTTGCAGCTTTATATTTCTTGGGTATCTTTATCTCAATGATTGCAGAGAGCTAATTGAGCTGCCACACAACATCAAAACCCTGTCAAGGTTAAGGACTCTTGAGATAAGAGGTTGTTGTGGTCTTCGATCTATACCGGAGCTTCCACCATCTATTCAAGTGTTTCGTGCTGATGGCTGCACATCACTGGAAACAATATTCAGTTTGAAGGCAGTATTTAGTTTGAATAGGGGAATTATCTCATTTGGAAATTGCATGAAATTGGAAAAGGAGTCCCTGAATGATATTATGGAAGATACACATCACACAATATTCAGAAATGCTTTGCTGTGGTTGGACTATTGGTCTAAAGGTAAATATATGTTGACGAATGATCATCGTTTTAGTAGCATGGTAGATATTGATAGTGTTTATCCAGGGTCTGAAGTTCCAAACTGGTTTAGTTATGTAGCAGCAGATAGGTCCATAACAATTGAACTTGATCAACCCGAAGACCAGCTGTTGGGTTTCTACTTCTGTTGTGTTGTTTCTGAAAAGTTGTCATCTTCTTATTTTAATAAATATGGTCGTGTGAGTATCAAGTGTAATTACAACCTCTTCAACAATGGTGTGAAGGCCACATTTGTAAGTCAAGCTATATACTTTCTCCATGAAAGAGCTCGAGGATGGAACGCTGATCACGTTTTAATATGGAATAGTCCATTGGGTAACCTGTTGAGTAACATTAACAGGTGCAGAGGTACTGAAGGCAGTGATGATGATGATGACAGGACTTGCAACCAAAAGATCTCTTTCAGATTTGGTTTTTTCAGAGCTGAGAAAGAAAGGGAAGAATGTGATGAAGAATGTTATATCAAAGGGTGTGGGGTATTTCCAATGTATGCCTCAACTGTAGTGGATGCCATTCGAAAGCTTGAATTGGAGTTCAACTTGAACCCGTCTGATCATACAACCATCCCAGGGATAAATCTGGACACATTGAAACGGGCCATGATCAGGAAGAGTAGAGGAAAATTAAAACTCCAAAACCATGATCCTTTTCGAGGAGAAGACATCCGCGATAATTTTCTTAGCCATTTGAGAAAAGAATTCCATCGTAACCAAATTGATTTCTTTGTTGATGATGAAAAGCTTCATCCAGGAGACGAGATTTCTTCCACACTTGTTCGAGCAATTGAGGAATCTTCCATTTCACTGATCATCTTCTCGAAACACTATGCTTCTTCGAGATGGTGTATGGAGGAGCTTGTGAAGATAATTGAATGCATGAAACAATATCAAAGGATTGTGATACCTGTCTTTTACAACATTGATCCTTCTGATGTCAGGCATCAGAAACGAACTTTTTCAGAGGCTTTTGATATCCACAAAGAAAGATATGAGGAGGAAAATATGCAGAATTGGAGATCCATTTTAAAGGAGGCAGCAAATCTATCTGGAATTCATTATCCATCAAAATATCGGTAA 3708 0.3835 MAASSSSSASSSNSFNFPEIKYDVFISFRGEDIRTNFLSHLRKELRRNQIDFFLDDEKLHPGNEISSTLLRAIEQSYVSLVIFSEHYASSRWCMEELVKIIQCMKQYQRIVIPVFYNIDPSDVRRQKGTFAEAFDLHKEKYEQENMQRWRSVLKETANLCGIHYPSKYGNEAELIEDIVKVISKKLSHPFSYAPEDYIGINENFRFLQPLLAMESNEVRYVGIWGMGGIGKTTIARAIYARYASQFEGCCFLENATEKWHKSSLLCLYEEVVSELLEGEHLLVKGSAQARFEYVKRRLNRKKVLIVFDSVDAFEMLDFPNRNQIFLAPGSRVIVTSRDMQILIAARVHAIYEVRGLSFRSSLKLFCLNAFDKIYPENGYEKLSAMAVEYAKGIPLALKLLGSFLRLRSGEAWRSELAKLKAHPDSSIFNVLKLSYEGLDDSDKSIFLDIAFFFKGKDKDYVIKFADSCGFYGGIGIDNLHRKALITISRYNTIKMHDLIQQMGLEIVYKESPKDLKKRSRLRNPEDVRNVLENSEGEKSVEGIMCDLSRIGDVHLNKDTFKNMPHLRFLKLYAPQDKRPSNNVYVPTTLEPFSAKLRYLEWNGYPLNSLPSRFCAEKLVELRMPNSQISKLWDGIKNLPNLTVLDLNGCKKLVELPDLSQATKLKSINLKECESLCQLHPSISYIRTLEYLDIYGCKQLKSLKGNFKSPKALHAGNCSSLEEFSVSSSEELRTLNLSSSRIKNLPNEFCSFIFLGYLYLNDCRELIELPHNIKTLSRLRTLEIRGCCGLRSIPELPPSIQVFRADGCTSLETIFSLKAVFSLNRGIISFGNCMKLEKESLNDIMEDTHHTIFRNALLWLDYWSKGKYMLTNDHRFSSMVDIDSVYPGSEVPNWFSYVAADRSITIELDQPEDQLLGFYFCCVVSEKLSSSYFNKYGRVSIKCNYNLFNNGVKATFVSQAIYFLHERARGWNADHVLIWNSPLGNLLSNINRCRGTEGSDDDDDRTCNQKISFRFGFFRAEKEREECDEECYIKGCGVFPMYASTVVDAIRKLELEFNLNPSDHTTIPGINLDTLKRAMIRKSRGKLKLQNHDPFRGEDIRDNFLSHLRKEFHRNQIDFFVDDEKLHPGDEISSTLVRAIEESSISLIIFSKHYASSRWCMEELVKIIECMKQYQRIVIPVFYNIDPSDVRHQKRTFSEAFDIHKERYEEENMQNWRSILKEAANLSGIHYPSKYR 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241806g00006 1235 Gene3D Ribonuclease Inhibitor 545 707 IPR032675 -
Stsc241806g00006 1235 Gene3D Ribonuclease Inhibitor 708 850 IPR032675 -
Stsc241806g00006 1235 SMART till_3 21 159 IPR000157 GO:0007165
Stsc241806g00006 1235 SMART till_3 1087 1225 IPR000157 GO:0007165
Stsc241806g00006 1235 ProSiteProfiles TIR domain profile. 1086 1235 IPR000157 GO:0007165
Stsc241806g00006 1235 SUPERFAMILY Toll/Interleukin receptor TIR domain 1094 1227 IPR035897 -
Stsc241806g00006 1235 SUPERFAMILY "Winged helix" DNA-binding domain 426 531 IPR036390 -
Stsc241806g00006 1235 PRINTS Disease resistance protein signature 297 311 - -
Stsc241806g00006 1235 PRINTS Disease resistance protein signature 220 235 - -
Stsc241806g00006 1235 PRINTS Disease resistance protein signature 390 404 - -
Stsc241806g00006 1235 PRINTS Disease resistance protein signature 636 652 - -
Stsc241806g00006 1235 Pfam NB-ARC domain 210 423 IPR002182 GO:0043531
Stsc241806g00006 1235 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 161 IPR035897 -
Stsc241806g00006 1235 FunFam Disease resistance protein (TIR-NBS-LRR class) 1087 1235 - -
Stsc241806g00006 1235 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 188 - -
Stsc241806g00006 1235 Pfam C-JID domain 885 1041 IPR045344 -
Stsc241806g00006 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 449 IPR027417 -
Stsc241806g00006 1235 Gene3D - 356 439 IPR042197 -
Stsc241806g00006 1235 Pfam TIR domain 1094 1221 IPR000157 GO:0007165
Stsc241806g00006 1235 Pfam TIR domain 21 188 IPR000157 GO:0007165
Stsc241806g00006 1235 ProSiteProfiles TIR domain profile. 20 186 IPR000157 GO:0007165
Stsc241806g00006 1235 Pfam Leucine Rich Repeat 617 636 IPR011713 -
Stsc241806g00006 1235 SUPERFAMILY L domain-like 543 826 - -
Stsc241806g00006 1235 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 724 IPR044974 GO:0006952
Stsc241806g00006 1235 Gene3D - 188 349 IPR027417 -
Stsc241806g00006 1235 Gene3D - 1093 1235 IPR035897 -
Stsc241806g00006 1235 Gene3D - 19 187 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241806g00006 Stsc-Chr241806 30949 35786 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241806g00006 22 803 WRKY Transcription Factor Family AT4G12020 32.409 1.60e-100 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241806g00006 - - ahf:112728390 1183.7