Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241806g00005 ATGGATGAAAATTTTAAACGTATTCAACCTTTATTGGCAATCGAGTCTGATGAAGTTCGATTTCTTGGACTTTGGGGTATGGGAGGGATTGGTAAAACAACCATTGCCAAAACAATATTTGACAGATATTCCTCTCGATACGAAGGTTGCTGCTTTCTGCAAAATGTAAGAGAAGAATCACAAAAGTATAGTCCACAGTACTTATATGAGAAACTTATTACTGAACTCCTTGAGGGGGAAAATCTCCTTGTGAAGGGATCAGCTCAATCAAGATCTATGTACGTCAAGATAAGGTTGAGTCGAAAAAAGGTTCTCATAGTGCTTGATGATGTTGATACATTAGACAAGTTAGAGCATCTAGCAAGAGAACAAATCTGTTTGGGAGCAGGTAGTAGAGTTATTGTAAAAACTAGAGATGAGCAGATACTAATTGCTGCAAGAGTTCATGACATATACAAAGTCCAGGAATTGAGCTTTGAAAGTTCCCTTGAGCTCTTTTGCTTAAAAGCCTTCCACAAAAGCTATCCTGAAAATGGATATGAAGAGCTTTCAGACATGGCAATTAGGTATGCGGAAGGCATTCCATTAGCCTTAAAAGTGTTGGGGTCCTATTTATGCTCAAGGAGTGCAGTAGCTTGGGAAAGAGAACACAAGGATAATGTCATAAGGTTTCTAGACTCTTGTGATTTCTTTGGAGGCATTGGAATAGACAACCTCCAACGTAAGGCTCTTATAACTATTTCACCAGAAGACACAATACAAATGCATGACCTGATACAGCAAATGGGTTTGCAAATTGTATTCAAGGAATCTACTAAGGACGTCAAAAAGCGTAGTCGATTGAAGAATCCTGAGGTTGTCAGGAATTTATTGGAAAATAGTAAGGGAGAAAAGTCAGCTGAAGGCATCATGTGTGACTTGTCCCAAATTGGAGATCTATGCTTAAATGCGAACTCCTTTAAGAATATGCCTCATCTAAGATTTCTTAAGCTTCATGCTTGTTCAGATCAAAGAACGTCAAATGTGTACGTTCCCAAAACCCTGAAGCTGTTTTGTGCTAAACTCAGGTATTTGGAGTGGAATAGTTATCCTCTGAATTCTCTACCATCAAGGTTTTGTACAGAGAAGCTTGTTGAGCTTAGGATGCCCAACGGTCAATTTTCTAAACTCTGGGACGGAACGCAGGATCTTGCCAATTTGACAATGGTTGACCTTTATGGATGTAAACAGTTGGTAGAGCTTCCAGATTTCAGTAAAGCAATAAAGCTTAAAACAATGATGCTTAAGGAGTGTGAAAAGCTATGTCAACTTCATCCATCTATTTTATCCCTCCAAACACTTGAGTATTTGGATGTTTATGGTTGCAAAGAATTGAAGAGTGTGAAATGTCATTTCAAGTCTCTTAAATCACTTTGTGCTAATGAATGTTCAAGCCTGGAGGAATTTTCAATGCAGTCTTTGTATTTGACTTTGAGTGGAATTAAGAGTTCGCAAAATGAATTCTGTGGCTTACCTCTTGAATATCTTAGATTTTGTGATTGCACAGAGCTAGTTGAGCTGCCACACAACATGAAAGCCTTATCAAGGTTAAGGTGTCTTGTCGTAAGTGGTTATTGTGGTCTTCGATCTATACCAGAGCTTCCGCCATCCCTTAAAGTGCTTTATGCTGATGACTGCACATCACTGGAAAGAATATTCAGTTTGAAGGAAGTATTTAGTTTGAATAGGAGAGAGATCTCATTTGTAAATTGCACGAGATTGGAAGAGGAGTCACGGAATGACATTATGAAAGATGCCCATCTCACAATATTCAGAAATTTTTTGCTGTGGTCAACAGCAAAACGAGATGATCAGAAGTATGGTAGTGTTTATTATCCAAGGAAGAAAGTTCCAGAGTGGTTCAGGTTTAGGACAGAAGAAGAAGCATCCATAATAATTGAACTAGAACAATGTAACTACCAGTTGTTGGGTTTCTTCTTCTGCTGTGTTGTTTCTCAAAAGTTACCTCCTCATTTTTTTAATGGATTTGGAGGTGTCGGCATCAGGTGTGAATACCGCCACTTGAGAGATGGTATAAAGCACAGATATTTAAGTGGATGGGGAGTCATTATTAGTAAAAGAAGATTGAACTCTGATCACATTATAGTTTGGACTGATCCAAGTGGTAGCTCCAACGTATTCAGTAAAATTGAAGAGTGCAGAGACAGTGATGACAGTGATGATGATGGCTACACTTGCAACCAAAAGATCTCATTCAGGTTCAGTGTTAATAGACCTGAGAAATGGTTGAGAGTGGAAGAAAGGGAAGAAGAAGATGATGAAGAATGTTATATCAAAGGGTGTGGGGTAATTCCAGTGTATGCCTCAACTGTACTGGATGCCATTCAAAATATTGAATTGGAGTTGAACCTGAACCCTCATCATGACTCCATCCCATCATGGATGGATCTCGACACATTGAAAAGTTGTATGATCCGGAAGAGTAGAGGAAAATCAAAACAATACGATGATTCTTCGTAA 2520 0.3865 MDENFKRIQPLLAIESDEVRFLGLWGMGGIGKTTIAKTIFDRYSSRYEGCCFLQNVREESQKYSPQYLYEKLITELLEGENLLVKGSAQSRSMYVKIRLSRKKVLIVLDDVDTLDKLEHLAREQICLGAGSRVIVKTRDEQILIAARVHDIYKVQELSFESSLELFCLKAFHKSYPENGYEELSDMAIRYAEGIPLALKVLGSYLCSRSAVAWEREHKDNVIRFLDSCDFFGGIGIDNLQRKALITISPEDTIQMHDLIQQMGLQIVFKESTKDVKKRSRLKNPEVVRNLLENSKGEKSAEGIMCDLSQIGDLCLNANSFKNMPHLRFLKLHACSDQRTSNVYVPKTLKLFCAKLRYLEWNSYPLNSLPSRFCTEKLVELRMPNGQFSKLWDGTQDLANLTMVDLYGCKQLVELPDFSKAIKLKTMMLKECEKLCQLHPSILSLQTLEYLDVYGCKELKSVKCHFKSLKSLCANECSSLEEFSMQSLYLTLSGIKSSQNEFCGLPLEYLRFCDCTELVELPHNMKALSRLRCLVVSGYCGLRSIPELPPSLKVLYADDCTSLERIFSLKEVFSLNRREISFVNCTRLEEESRNDIMKDAHLTIFRNFLLWSTAKRDDQKYGSVYYPRKKVPEWFRFRTEEEASIIIELEQCNYQLLGFFFCCVVSQKLPPHFFNGFGGVGIRCEYRHLRDGIKHRYLSGWGVIISKRRLNSDHIIVWTDPSGSSNVFSKIEECRDSDDSDDDGYTCNQKISFRFSVNRPEKWLRVEEREEEDDEECYIKGCGVIPVYASTVLDAIQNIELELNLNPHHDSIPSWMDLDTLKSCMIRKSRGKSKQYDDSS 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241806g00005 839 Gene3D Ribonuclease Inhibitor 483 608 IPR032675 -
Stsc241806g00005 839 Gene3D Ribonuclease Inhibitor 271 482 IPR032675 -
Stsc241806g00005 839 Pfam NB-ARC domain 15 211 IPR002182 GO:0043531
Stsc241806g00005 839 SUPERFAMILY L domain-like 304 587 - -
Stsc241806g00005 839 Pfam C-JID domain 626 789 IPR045344 -
Stsc241806g00005 839 Gene3D - 1 151 IPR027417 -
Stsc241806g00005 839 Gene3D - 156 223 IPR042197 -
Stsc241806g00005 839 PRINTS Disease resistance protein signature 21 36 - -
Stsc241806g00005 839 PRINTS Disease resistance protein signature 191 205 - -
Stsc241806g00005 839 PRINTS Disease resistance protein signature 98 112 - -
Stsc241806g00005 839 PRINTS Disease resistance protein signature 395 411 - -
Stsc241806g00005 839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 224 IPR027417 -
Stsc241806g00005 839 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 584 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241806g00005 Stsc-Chr241806 27219 30177 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241806g00005 8 806 WRKY Transcription Factor Family AT5G45050 26.474 1.56e-70 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241806g00005 - - adu:107475756 893.649