Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241804g00005 ATGGGGTTTGTGATTGTTGGAGGCGATAACCAGAACCAGAACGAGAAGCACCAGCATCACCATCACCACCACCACAACAATATGATGAGTTTTCACCTTCACATGCCCCATCTCCATTTCAACCACCACGAGAAGAAGGAGGATTTGAAGGACATACCGAAGGGATGCTTGGCGATTATGGTGGGCCAAGGAGAAGAGCAGCAGAGGTTTGTTATTCCTGTTATTTACTTCAACCACCCACTCTTCTTGCAGCTCCTCAAAGAAGCTGAAGACGAGTATGGTTTCGATCAGAAAGGACCTATCACCATACCCTGCCACGTGGAAGAGTTTCGAACCGTCCAGGGTATGATTGACAGGGAAAGATCTCACCACCATCACCATAATCACCATCATCATCATCATGCCTGGTGCTTCAAAGTTTGA 423 0.4728 MGFVIVGGDNQNQNEKHQHHHHHHHNNMMSFHLHMPHLHFNHHEKKEDLKDIPKGCLAIMVGQGEEQQRFVIPVIYFNHPLFLQLLKEAEDEYGFDQKGPITIPCHVEEFRTVQGMIDRERSHHHHHNHHHHHHAWCFKV 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241804g00005 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 41 112 IPR003676 GO:0009733
Stsc241804g00005 140 Pfam Auxin responsive protein 44 115 IPR003676 GO:0009733
Stsc241804g00005 140 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241804g00005 Stsc-Chr241804 41609 42031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241804g00005 51 111 Calmodulin-binding Proteins AT5G20810 55.738 2.79e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241804g00005 K14488 - gmx:100526867 182.185