Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241802g00006 ATGAGCTCCGAAATAGTTCTCCATCAGCAATTTTCCCAACCAGATGCTATTCCCATTTCCTCCACCGCCACCGCCGCCACCACAACTACTAAAGCTGCCACCAACACCGCCGTCGCCCTCAGAAAATCCTCCGGCGCCGGCACATTATCCACCACCTCGTCGCGCTCCAACAAAGACCGTCACACCAAGGTCAATGGCCGCGGCCGCCGCGTTCGCATGCCACCGCTTTGCGCCGCCCGGATCTTCCAGCTCACACGGGAGCTAGGCCACCGCTCTGACGGCGAAACCATAGAGTGGCTCCTCCGCCACGCCGAGCCATCCATAATCGCTGCAACCGGAACCGGCACTGTCCCTGCCGCGCCGGTTTCTTCCTCAGCCGCCGCAGTGACATCCTCAGCTCCCTCTGTGCCGTGCCGTGTCCAGCCGTCTGCATCCGCCACCCCGACGACGGTGTGCGGCGGTGGGAGTCAGTGGCCGAGCTGTCGACTGGACCTGTGCCAGCCTCCGGGTGGAATGGAATACGCGGCGGCATTGAACGGCCATCGGTACATGCCGTTCACGTCATTGCTGTTGCAGCCGGCAACTGCGGATGAATCGCAGCACGAGGAGGCTCTCAGCGATCAATGA 627 0.6252 MSSEIVLHQQFSQPDAIPISSTATAATTTTKAATNTAVALRKSSGAGTLSTTSSRSNKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGTGTVPAAPVSSSAAAVTSSAPSVPCRVQPSASATPTTVCGGGSQWPSCRLDLCQPPGGMEYAAALNGHRYMPFTSLLLQPATADESQHEEALSDQ 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241802g00006 208 ProSiteProfiles TCP domain profile. 57 111 IPR017887 -
Stsc241802g00006 208 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 148 IPR005333 GO:0003700
Stsc241802g00006 208 MobiDBLite consensus disorder prediction 41 68 - -
Stsc241802g00006 208 MobiDBLite consensus disorder prediction 41 55 - -
Stsc241802g00006 208 Pfam TCP family transcription factor 56 132 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241802g00006 Stsc-Chr241802 23611 24628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241802g00006 58 195 TCP Transcription Factor Family AT2G37000 55.396 2.27e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc241802g00006 TCP 1.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241802g00006 - - cam:101510590 219.935