Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241802g00002 ATGGCTAAGTCCTCATTTGTTGGAAGGATGCAAAGGATGCAAAAGGGTATCTCAAACTTAGTGCATCACCACAGAAGGGCTAAATCACTAAGTTACATTAGTGATGATGATGATGAACATGTTATTATTACCAATAACACTAGGGAAGGGTACTTTTCTGTTGTTGCAGAGAAGGGTAGGGAGAGAAAGAGGTTCAGTATTGAGTTGGATTACCTGAATGATCCTGAATTCAAGGTGCTTCTTGATCAAGCTCAACAAGAGTATGGTTTCAGACAGAAGGGAGCTCTTTCTGTCCCCTGCAGACCTCAAGAACTCCAAAAGATTTTGGATGGTGGCAATCAAAGAAGGTTCAGTAGCTCATAA 363 0.4105 MAKSSFVGRMQRMQKGISNLVHHHRRAKSLSYISDDDDEHVIITNNTREGYFSVVAEKGRERKRFSIELDYLNDPEFKVLLDQAQQEYGFRQKGALSVPCRPQELQKILDGGNQRRFSSS 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241802g00002 120 Pfam Auxin responsive protein 43 109 IPR003676 GO:0009733
Stsc241802g00002 120 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 25 108 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241802g00002 Stsc-Chr241802 6065 6427 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241802g00002 46 109 Calmodulin-binding Proteins AT3G43120 39.062 7.80e-11 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241802g00002 - K14488 aip:107628081 183.726