Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241802g00001 ATGGCAAAGACAAGTGTTTGTGGAAGATTGTTGAAGGGAGGGTTTGGAGGAATGTTGGTGATAATGAGGAAACTGAGGACTAGCTTATCACATTCAAAAGGGGTGAAACAAGGTCACTTTGTGGTGATTGCAACTCAAGGGTGGAAGCCAGAGAGGTTCTTTGTGAAATTGAGCTATTTGGATCACCCTGAGTTTGTGAAGTTGCTAGAGCAGGCTGAAGAAGAGTTTGGATTCTCTCAGGTGGGAGCATTGGAAATTCCTTGTGAGCCTGATGAGTTGAAGAAAATCATTAGAAGTAAATTAATAAAGCATTGA 315 0.4159 MAKTSVCGRLLKGGFGGMLVIMRKLRTSLSHSKGVKQGHFVVIATQGWKPERFFVKLSYLDHPEFVKLLEQAEEEFGFSQVGALEIPCEPDELKKIIRSKLIKH 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241802g00001 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 23 96 IPR003676 GO:0009733
Stsc241802g00001 104 Pfam Auxin responsive protein 30 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241802g00001 Stsc-Chr241802 1008 1322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241802g00001 35 97 Calmodulin-binding Proteins AT4G34750 42.857 1.08e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241802g00001 K14488 - gmx:100795119 136.732