Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc241801g00010 | ATGTCTTCCAATTTGCACAGAGGAGGTTCATCCTACGGTGATGCCGCCCCTTTCCGATCCAGAGAGGGGCTTAGCACGAGATCCGCTGCTTCCTCCGATGAAATCCAATTGCGCATTGATCCCATGGACATGGACTTGGACAACGAAATCACCGGTCTTCGTGGCCAAGTCAAAAAGTTGAGAAATGTTGCTCAAGAAATAGGTTCAGAAGTAAAGCAGCAGAGGGATTTTTTGGAAGAGCTGCAAACAATCATGTCGAATGCTCAAGCCGGGGTTAAGAATAATATAAGAAGATTGAACAAGAGCATCGTTCGAAATGGTTCAAACCATGTTGTTCATGTGGTTGTTTTTGCATTAATTTGTTTCTTTGTAGTGTACGCTTGGTCAAAGATGTTTAGGAAATGA | 405 | 0.4346 | MSSNLHRGGSSYGDAAPFRSREGLSTRSAASSDEIQLRIDPMDMDLDNEITGLRGQVKKLRNVAQEIGSEVKQQRDFLEELQTIMSNAQAGVKNNIRRLNKSIVRNGSNHVVHVVVFALICFFVVYAWSKMFRK | 134 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc241801g00010 | 134 | CDD | SNARE_Qc | 45 | 101 | - | - | |
Stsc241801g00010 | 134 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 40 | 102 | IPR000727 | - | |
Stsc241801g00010 | 134 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Stsc241801g00010 | 134 | Gene3D | - | 47 | 109 | - | - | |
Stsc241801g00010 | 134 | SMART | tSNARE_6 | 35 | 102 | IPR000727 | - | |
Stsc241801g00010 | 134 | SUPERFAMILY | SNARE fusion complex | 33 | 101 | - | - | |
Stsc241801g00010 | 134 | FunFam | Bet1-like protein At4g14600 | 46 | 104 | - | - | |
Stsc241801g00010 | 134 | PANTHER | GOLGI SNARE BET1-RELATED | 19 | 130 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc241801g00010 | Stsc-Chr241801 | 82350 | 84220 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc241801g00010 | 25 | 131 | SNARE and Associated Proteins | AT3G45280 | 26.606 | 6.46e-06 | 42.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc241801g00010 | K08505 | - | cpap:110816711 | 206.068 |