Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241801g00003 ATGGGTTATCTCTCTTGCAATGCAGACTCTGCAATCGCCACCTGTGACCCTAACTACTGGCATCTCAAGAAACCCAAAACCACCACCAACCTCCTTCAAATCCGCCACTTCCATTACTCCGACCTTGTCGCCGCCACTAAAAGCTTCTCCCCCGATAGCTTCCTCGGTAAAGGCAGCCACGGCAGCGTCTACAGAGCCACACTCGACGGCGGCAACCTCATCGCCGCCGTCAAGAAAACTAAGCACGCCAAACCGTCCTCCCGCCGTCACCAAAGCCCCGCCGCAGCCTCTTGCACTGGCTGCGGCAACTGCACCAGCCCGGCGGAGAACGAGATCGAGATCCTCTCACGCGTCTATAGCCCCCGCCGCCTTGTGAACCTCATCGGATTCTGCACCGATCCGAACAACGGCGGCAAGCTCATCGTCGTGGAGTACATGCCGAACGGCTCCCTCCACGAGCTCCTCCACTCACCGGTCCGACCGCCCGGTTGGAGCGCACGCATCCGGTTCGCACTTCAAATTGCGAAAGCGGTTCACGCGCTTCACACATCAAACCCTCCGGTGATCCACAGAGACATAAAATCTTCCAACGTTCTCATCGACGGAGCGTGGAACGCGAGGCTCGGTGACTTTGGCCTTGCGCTTAGAGGACACGTGGAGGACGTGCGCGTGAAGTGCACGCCTCCAGCTGGCACGTTAGGGTACCTTGATCCTTGCTATCTTGCGCCTGAGGATCTTAGCGCCAAGAGCGACGTCTTCAGCTTCGGGATCTTGCTTTTAGAGATTCTCAGCGGCAGGAACGCCATCGACGTGAACTTCAGTCCACCGTCGGTGGTGGACTGGGCGGTGCCGTTGATAAAGAGAGGAGAGCACTCCGGGATTTGCGACCGGCGGATCGGAGCGCCGTCGGATAAAGAGGTGGTTCGAATGGTGGCGGTGATGGCGGCGAGGTGCGTGAGGTCCACGTCGGAGAAGAGGCCGTCAATGGAGGAGGTTGTGCAGTGCTTGAAGATTGCTAGGAAGAGGATGCGGGCGGCGCCGATTTGGAGCGGGTTGAGGTGGCGCGTGAGGCGCGTGGAGAGTGAGAGACGGTTAGAGTGTGATAGTTATTACGATAAGAGTTCGGAGGAGGTAGTGAGAGCGGCTAAGGGCGGTGGAAGTAGAAGGAAGAAGAACAGGAAGGTATCCAATGTGACGGGTGCAGAGTATTATGGTGGACCCTCATCCAATCATGTGGTGAGGTCAAAGTCAACCGGTGCGGGTTCTCTGAAAGTGAATTCGGATTCGGGTGGGTTTCGGGCGCAACAAATCGGGTCAGGTTTCGTGAGGAGGAGGTCGAGGCTTCACAAGTCTAGGTCTATGGGGGTGTTGCAAGGTTCTTCTCATTTTTCATCACATTATTATGAAAATAATAATAAGAATGAGAGTGATCCAATGCGTTCGTTAGAGATGGCAATGTCGTCTAAGTGGGTCATTACGGATAGGTTGGAAAAGAAATTGCTTGAGAAACCGTTAGTTAATTCTTGCAACACATAG 1536 0.5527 MGYLSCNADSAIATCDPNYWHLKKPKTTTNLLQIRHFHYSDLVAATKSFSPDSFLGKGSHGSVYRATLDGGNLIAAVKKTKHAKPSSRRHQSPAAASCTGCGNCTSPAENEIEILSRVYSPRRLVNLIGFCTDPNNGGKLIVVEYMPNGSLHELLHSPVRPPGWSARIRFALQIAKAVHALHTSNPPVIHRDIKSSNVLIDGAWNARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPEDLSAKSDVFSFGILLLEILSGRNAIDVNFSPPSVVDWAVPLIKRGEHSGICDRRIGAPSDKEVVRMVAVMAARCVRSTSEKRPSMEEVVQCLKIARKRMRAAPIWSGLRWRVRRVESERRLECDSYYDKSSEEVVRAAKGGGSRRKKNRKVSNVTGAEYYGGPSSNHVVRSKSTGAGSLKVNSDSGGFRAQQIGSGFVRRRSRLHKSRSMGVLQGSSHFSSHYYENNNKNESDPMRSLEMAMSSKWVITDRLEKKLLEKPLVNSCNT 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241801g00003 511 Gene3D Phosphorylase Kinase; domain 1 21 145 - -
Stsc241801g00003 511 SUPERFAMILY Protein kinase-like (PK-like) 27 337 IPR011009 -
Stsc241801g00003 511 ProSitePatterns Protein kinases ATP-binding region signature. 55 79 IPR017441 GO:0005524
Stsc241801g00003 511 ProSiteProfiles Protein kinase domain profile. 49 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241801g00003 511 Gene3D Transferase(Phosphotransferase) domain 1 146 347 - -
Stsc241801g00003 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Stsc241801g00003 511 PANTHER OS01G0253100 PROTEIN 30 340 - -
Stsc241801g00003 511 SMART serkin_6 49 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241801g00003 511 Pfam Protein kinase domain 53 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241801g00003 511 FunFam Serine/threonine-protein kinase-like protein 146 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241801g00003 Stsc-Chr241801 29633 31587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241801g00003 35 347 Receptor kinase-like Gene Family AT3G59420 39.937 5.71e-62 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Stsc241801g00003 Pkinase 3.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241801g00003 - - ahf:112706221 815.453