Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241800g00008 ATGTCAGTAACATCATCTTCATCATCTCGAGTCTACGACACCATTATCGAATGTCTCTCCGAATTATCTCAATCAAACTCCATTGAAGCTCAAGAAAAGTCCCTTCAAACCCTAGCTTCCATCACAAAAGTAAGTCCCCAAAATCGAAACTTTTTATCCCAAATTGATGGAGCAATCCCAACCCTAGCCACACTCACAAGCTCTCCCTCTCCCATAATCCAAACCCTATCTTTGCTAACCCTCTTCAACCTTTCTCTAAACACAAACCTCAAGCATTCCCTCGCGGACATGCAAACCATTCATCAACTCAACTCACGAATCGTCTCATCATCATCTTCGAGTTCTCCTGATTCATGCAAGCTAGCTTCAAGCTTGATATGCAGCTTGGCCATGCATGACAAGAACAAGGCCAAATTCGGCGTCGCCGGAACGGTTCAACTGCTAGTAAAAGCCATTAAGAACTCTCACCATGAGTTTCACCACCATCTGCTGAGTTCTTTAGCAGAGCTTGTTCATTTCCATGGGAATTGCACTCTGGCTGTAAGATCCGGTGCAATTCCGGTGCTGCTCGGTGTCGTGAAGAACGCCATTGACGAAGACTTAGCTTCTACTTCTCTGGTAGTGCTTGGTTTGCTTGCGAGGTTCGACGAAGGGTTGAATGGGTTGAAGAAGAGTGAAGAGATAGTGAGTGATATGCTGTGTGTGTTGAAAGGGAGATCCATGTTGAGCAAAGAGGGTGCGGTTGATATTCTCCTTCGGCTGTTCGATGAGGATTGCGAAGAAAGATGCGTGAAGGAGGCGTTGTTGTTGCCGGAATTCGCCATGGCTGTGACGGATGTTTCTGTGAGAGGATCTGTGAAGCTTCGAGGTAAGGCTAATTTGCTCTTGAAGAAGATGGCTGATGCCAGCTTAGTTTCTGACATGGAACAATGGATCTAA 939 0.459 MSVTSSSSSRVYDTIIECLSELSQSNSIEAQEKSLQTLASITKVSPQNRNFLSQIDGAIPTLATLTSSPSPIIQTLSLLTLFNLSLNTNLKHSLADMQTIHQLNSRIVSSSSSSSPDSCKLASSLICSLAMHDKNKAKFGVAGTVQLLVKAIKNSHHEFHHHLLSSLAELVHFHGNCTLAVRSGAIPVLLGVVKNAIDEDLASTSLVVLGLLARFDEGLNGLKKSEEIVSDMLCVLKGRSMLSKEGAVDILLRLFDEDCEERCVKEALLLPEFAMAVTDVSVRGSVKLRGKANLLLKKMADASLVSDMEQWI 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241800g00008 312 Gene3D - 2 303 IPR011989 -
Stsc241800g00008 312 PANTHER U BOX DOMAIN-CONTAINING 18 298 - -
Stsc241800g00008 312 SUPERFAMILY ARM repeat 15 267 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241800g00008 Stsc-Chr241800 53366 54322 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241800g00008 14 261 U-box Gene Family AT1G23030 24.194 5.17e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241800g00008 - - gmx:121174819 377.867