Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241794g00010 ATGGCAAGGCAATTAGGCTACTTGAGATTTTTTGTTGTTTGTGTGGTGGCATCAGTTGCAGCAACACAAGCTCAGTTGCAGCTTGGTTTCTATGCTAAAAGCTGCCCAAAAGCTGAGAAGATTGTTTCTGACTTTGTGCATGAGCACATCCACAATGCTCCTTCACTTGCAGCTGCATTGATAAGAATGCATTTTCATGATTGTTTTGTCAGGGGGTGTGATGCATCAGTGCTTCTGAACAGCACAAACAACCAAGCTGAGAAGAATGCTCCACCAAACTTGACAGTGAGAGGCTTTGACTTCATTGAGAGAATAAAGAGCCTTGTGGAAGCTGCATGCCCTGGTGTTGTTTCTTGTGCTGATATCTTAACTTTGGCTGCCAGAGACTCCATTGTTGCCACTGGTGGCCCCTTCTGGCAAGTTCCAACAGGTAGAAGGGATGGTTTAGTCTCTAATTTGTCAGAAGCCTCAAGAAACATTCCAGCACCATTTGACAACTTCACCACCCTGCAAACTAAGTTTAACAACGTTGGACTTGATCTCAATGACTTAGTCATCCTATCTGGTGCACACACAATTGGTGTTTCTCACTGTTCATCAATCAGAACCCGTTTGTACAACTTCACTGGGAAGCTGGATCAAGACCCTGCACTAGACAGTGAGTATGCACAAAATCTGAAGAAATTCAAGTGCAAGAGCATCAATGACAACACCACTTTGATTGAGATGGACCCTGGTAGCCGCAAGACCTTTGATCTTGGTTACTATAACCAAGTTGTTAAGAGAAGAGGCCTATTCACTTCAGATTCACAGTTGTTGGTCAACACTGTTACAAAGTCTCTTGTGAACCAATTGCTTCAAGGCTCACTTCAGAATTTCTATACTCAATTTGCAAAGTCTATGGAGAAAATGGGAAGAATTAATGTCAAGACAGGGACACAAGGTGAAATCAGGAAGCAATGTGCATTGGTAAATAGCTAA 981 0.4281 MARQLGYLRFFVVCVVASVAATQAQLQLGFYAKSCPKAEKIVSDFVHEHIHNAPSLAAALIRMHFHDCFVRGCDASVLLNSTNNQAEKNAPPNLTVRGFDFIERIKSLVEAACPGVVSCADILTLAARDSIVATGGPFWQVPTGRRDGLVSNLSEASRNIPAPFDNFTTLQTKFNNVGLDLNDLVILSGAHTIGVSHCSSIRTRLYNFTGKLDQDPALDSEYAQNLKKFKCKSINDNTTLIEMDPGSRKTFDLGYYNQVVKRRGLFTSDSQLLVNTVTKSLVNQLLQGSLQNFYTQFAKSMEKMGRINVKTGTQGEIRKQCALVNS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241794g00010 326 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Stsc241794g00010 326 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241794g00010 326 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241794g00010 326 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241794g00010 326 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241794g00010 326 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241794g00010 326 FunFam Peroxidase 161 304 - -
Stsc241794g00010 326 ProSiteProfiles Plant heme peroxidase family profile. 25 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241794g00010 326 SUPERFAMILY Heme-dependent peroxidases 25 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc241794g00010 326 FunFam Peroxidase 29 171 - -
Stsc241794g00010 326 Gene3D - 29 325 - -
Stsc241794g00010 326 CDD secretory_peroxidase 25 324 IPR033905 GO:0004601|GO:0042744
Stsc241794g00010 326 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241794g00010 326 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241794g00010 326 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241794g00010 326 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241794g00010 326 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241794g00010 326 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241794g00010 326 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241794g00010 326 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241794g00010 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241794g00010 326 Pfam Peroxidase 43 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241794g00010 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Stsc241794g00010 326 Gene3D Peroxidase, domain 2 161 304 - -
Stsc241794g00010 326 PANTHER PEROXIDASE 25-RELATED 16 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241794g00010 Stsc-Chr241794 49032 50807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241794g00010 8 326 Peroxidase AT1G05260 67.712 3.53e-164 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241794g00010 K00430 - gmx:102660930 504.212