Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241794g00004 ATGTGCAGAGGTCCACAAGTTAAAGGGCATGGCTCAGCAAGAGGAATAGGAGGAATATCTTCTTCTTCTCCCTCTTCTTCTACATGCTGTTGTGAGTTATGTGGATTAAGGGCTTCATTGTATTGCCATGCTGATGATGCATATCTATGTAGAAAATGTGACAAATGGGTTCATGAAGCAAATTTCTTGGCCCTTAGGCACATTAGGTGCTTTCTCTGCAACACATGCAGCAATCTCACAAGAAGATGTGTTATTGGTGCTTCATCTGAGGTTATTCTTCCTGCTAATGTAAGTTGGGCCAATGGAAACCTTCCTAACAACAGCACCAACACAACAACAACAACATCATGTTCAAGAATGCATGATAACCATGATGATGATGATGTTGATGTTGGCCTTTCCCTGTCTCTTTGA 414 0.4155 MCRGPQVKGHGSARGIGGISSSSPSSSTCCCELCGLRASLYCHADDAYLCRKCDKWVHEANFLALRHIRCFLCNTCSNLTRRCVIGASSEVILPANVSWANGNLPNNSTNTTTTTSCSRMHDNHDDDDVDVGLSLSL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241794g00004 137 CDD Bbox1_BBX-like 30 72 - -
Stsc241794g00004 137 MobiDBLite consensus disorder prediction 1 26 - -
Stsc241794g00004 137 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 30 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241794g00004 Stsc-Chr241794 19389 20018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241794g00004 1 110 C2C2-CO-like Transcription Factor Family AT3G21890 44.144 1.13e-24 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241794g00004 - - aip:107610340 181.8