Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241791g00005 ATGCTAACCCTCTACCTCCCTCCTCCTTCTTCCTCGTTCTCTGTTGTTCCCTTTTATGCCAATTACCCACTGTTTATACAAAATCCACAGTTATTGATTCCTTCCAATCTTAGTTACTCGTTTTCTGCTTCAGCAACCAGAAAGTTGAAGACTTTTCAGCTCAAGGCTGGATTTTGGGAGTCAATTAAATCTGGGTTGATTAAGAACAACACTACGCAAGTTGTTGATCCACCCGATGCGGATGAAGAAGATGAAGAACCTATGCCTCAAGAGTTTGTCCTTGTTGAAAAGACTGAACCTGATGGAACAGTCGAGCAAATAATATTCTCTTCAGGTGGAGATGTTGATGTTTATGACCTTCAAGCTCTTTGTGACAAGGTAGGGTGGCCACGGAGACCATTGTCGAAATTAGCTGCTGCTTTGAAAAATAGCTATATAGTGGCCTCATTGCATTCTGTTAGAAAGTCTCCGGGGTCAGAGGGGAATGAACAAAAGAGATTAATCGGCATGGCTCGTGCAACTTCAGACCATGCCTTCAATGCCACAATTTGGGATGTCCTAGTTGATCCTGGTTACCAGGGCCAAGGTCTTGGTAAAGCTCTTGTAGAGAAACTGATTCGAGCTCTTTTGCAAAAGGACATCGGCAATATAACTCTGTTTGCAGATAGTAAAGTTGTGGATTTCTACCGGAATTTAGGGTTTGAAGCTGATCCTGAGGGCATAAAAGGCATGTTTTGGTACCCAAATTACTAG 753 0.4276 MLTLYLPPPSSSFSVVPFYANYPLFIQNPQLLIPSNLSYSFSASATRKLKTFQLKAGFWESIKSGLIKNNTTQVVDPPDADEEDEEPMPQEFVLVEKTEPDGTVEQIIFSSGGDVDVYDLQALCDKVGWPRRPLSKLAAALKNSYIVASLHSVRKSPGSEGNEQKRLIGMARATSDHAFNATIWDVLVDPGYQGQGLGKALVEKLIRALLQKDIGNITLFADSKVVDFYRNLGFEADPEGIKGMFWYPNY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241791g00005 250 PANTHER ACYL-COA N-ACYLTRANSFERASE 36 247 IPR045039 GO:0008080
Stsc241791g00005 250 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 107 250 IPR000182 GO:0016747
Stsc241791g00005 250 CDD NAT_SF 163 219 - -
Stsc241791g00005 250 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 116 239 IPR016181 -
Stsc241791g00005 250 FunFam Putative acetyltransferase NSI 111 247 - -
Stsc241791g00005 250 Pfam Acetyltransferase (GNAT) family 116 234 IPR000182 GO:0016747
Stsc241791g00005 250 Gene3D - 111 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241791g00005 Stsc-Chr241791 39271 43078 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc241791g00005 Acetyltransf_1 5.3e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241791g00005 K22450 - gmx:100799333 412.535