Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241785g00014 ATGCGCCAGATTGCAGAGGCATGTTTGGAAGCTCCTGTCAATAATGTAGTAATTAATGTCCCTGCTTATTTCAGTGACTTTCAACGTAAAGCCACGAAAGATGCTGGTGCCATTGCGGGCCTCAATGTCATCAGAATTATTAACGAGCCTACTGCTGCAGCAATTGCATATGATAAAGTCTTTGAAGTTAAGGCCACGACAGGGAACAATCACCTTGGTGGAGAAGACTTTGATAACAAAATAGCGAATTACTTTGTACAAGAGTTCAAAAGGAAGAATAAAGTGGATATTAGTCGGAACCCAAAAGCCTCGAGGAGGTTGAAAAATGCATGTGAAAGGGCAAAAAGAACACTCTCATTTACTTATGTTACCGTCACTGAACTTGATGCTTTACATCAAGGGATTGAGCTTTATACATCACTCAGCCGTGCCAAGTTTGAAGAACTACACATGGAACTCTTTAGAGTGTATGGAAATAGTAAATAG 486 0.4033 MRQIAEACLEAPVNNVVINVPAYFSDFQRKATKDAGAIAGLNVIRIINEPTAAAIAYDKVFEVKATTGNNHLGGEDFDNKIANYFVQEFKRKNKVDISRNPKASRRLKNACERAKRTLSFTYVTVTELDALHQGIELYTSLSRAKFEELHMELFRVYGNSK 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241785g00014 161 Gene3D Actin; Chain A, domain 4 74 155 - -
Stsc241785g00014 161 FunFam Heat shock 70 kDa 73 156 - -
Stsc241785g00014 161 FunFam Endoplasmic reticulum chaperone BiP 1 67 - -
Stsc241785g00014 161 Gene3D - 59 73 - -
Stsc241785g00014 161 Gene3D - 1 58 - -
Stsc241785g00014 161 Pfam Hsp70 protein 1 57 IPR013126 GO:0005524|GO:0140662
Stsc241785g00014 161 Pfam Hsp70 protein 60 155 IPR013126 GO:0005524|GO:0140662
Stsc241785g00014 161 SUPERFAMILY Actin-like ATPase domain 1 57 IPR043129 -
Stsc241785g00014 161 SUPERFAMILY Actin-like ATPase domain 57 154 IPR043129 -
Stsc241785g00014 161 PANTHER HEAT SHOCK PROTEIN 70KDA 1 155 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241785g00014 Stsc-Chr241785 71600 72170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241785g00014 1 155 Calmodulin-binding Proteins AT3G12580 57.219 3.52e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241785g00014 K03283 - psom:113309797 207.608