Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241785g00013 ATGGACATGATGTTGTCCTTGTTGGTGACTCTTCTAGGATTCCCAAAGTACCAGCAGTTGTTGCAGGAATTCTTCAGAGGTAAGGATCTTTGCAAGAGTATCGGCCCGGCTGAAGCTGTTGCTTGTGGAGCAGCGGTTCAGACTGCTTTATTGAGCGAAGACATCAAGAAAGCACAGAGCTGGTTTTGTTGGATGTACACCCTGTCACTTGGTATAAGGAATGAAGTTAAAATAACCAACGACAAATTAAGATTTTCATCCGAGGAAATTCAAAGATTGATCGAGGAAGCTGACAAGTACAAGGTGGAAGATGCAAAGTTCCTTGAGAAGGCTAATGCAATGAATACTTTGGAGGTTTATGTTTACGAGATGAAAAAAGCTCCCAGCGATAAAACATGA 399 0.4211 MDMMLSLLVTLLGFPKYQQLLQEFFRGKDLCKSIGPAEAVACGAAVQTALLSEDIKKAQSWFCWMYTLSLGIRNEVKITNDKLRFSSEEIQRLIEEADKYKVEDAKFLEKANAMNTLEVYVYEMKKAPSDKT 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241785g00013 132 Pfam Hsp70 protein 15 74 IPR013126 GO:0005524|GO:0140662
Stsc241785g00013 132 Gene3D - 15 31 - -
Stsc241785g00013 132 Coils Coil 76 103 - -
Stsc241785g00013 132 Gene3D - 32 48 - -
Stsc241785g00013 132 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 63 132 IPR029047 -
Stsc241785g00013 132 PANTHER HEAT SHOCK PROTEIN 70KDA 14 72 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241785g00013 Stsc-Chr241785 70907 71580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241785g00013 1 131 Calmodulin-binding Proteins AT5G02500 37.778 1.40e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241785g00013 K03283 - rcn:112169496 76.2553