LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc241783g00013	ATGGTTTCGGTTCATCCACAAGCGTGTCCTTTCTTCGTCTTGTCTTCGTCTTCTTCCTCCTCTTTTGTTGGCGGTTCACTCCAGTTTCGTCGTTATCTCTCTTTAAGCCCACCGAGAATCTGCGCCAGGGAGCATCCTTCTTTCTTCTGCAATTCTTCATGGCAAGAGCTCGCTGGAGTTTTACTGTTCTCGGCGTTTCCATTCGCCGCCGTGAAAGCTATAGCTAATAGTCCTCTAGGGGAATCACTTCAGAGGAAAATGGAGGAGAGAAAGAAATTTGCTGTCGGAAACTCTTCCAAATTCAAGGCCTTAGCCCAGGAGGCCCGAAACAAGAGCTTTTGGTATGGAGAAGGTCGGCCTGGTTGGCTTGGTCCTATTTCATATGAATATCCATCATATCTTACTGGGGAACTGCCTGGAGATTATGGCTTTGACATTGCCGGGCTTGGCAAGGATCCTGTCACACTGCAGAAATATTTCAACTTTGAGATATTGCATGCTCGGTGGGCAATGCTTGCATCTATTGGTGCTCTTATTCCTGAAACATTGGACCTATTGGGAACCGTTCACTTTGTCGAACCTGTGTGGTGGCGTGTTGGTTATTCAAAGCTCAAGGGAGATACTCTAGATTACCTGGGCATCCAGGGTCTTCATTTAGCTGGTAGCCAAGGGGTGCTTGTGATTGCTATTTGCCAAGCTCTCCTTATGGTTGGACCAGAATATGCTAGATATTGTGGAACTGAGGCGTTGGAGCCTCTAGGAATATTTCTGCCTGGTGATATAAATTATCCTGGAGGAGCATTGTTTGATCCCTTAAATTTGTCCAAAGATCCTGAAGCTTTTGAGGATTTGAAGGTGAAAGAAATTAAAAATGGACGCCTAGCAATGATTGCCTGGTTAGGCTTTTACGTGCAAGCAGCTCTGACGGGTAAAGGTCCTGTGCAGAACTTTCTTGACCACATCTCTGATCCTTTCCATAATAACTTGCTTGCTTCACTAAACTTCGTGAAAATACTTAATTAA	1023	0.4516	MVSVHPQACPFFVLSSSSSSSFVGGSLQFRRYLSLSPPRICAREHPSFFCNSSWQELAGVLLFSAFPFAAVKAIANSPLGESLQRKMEERKKFAVGNSSKFKALAQEARNKSFWYGEGRPGWLGPISYEYPSYLTGELPGDYGFDIAGLGKDPVTLQKYFNFEILHARWAMLASIGALIPETLDLLGTVHFVEPVWWRVGYSKLKGDTLDYLGIQGLHLAGSQGVLVIAICQALLMVGPEYARYCGTEALEPLGIFLPGDINYPGGALFDPLNLSKDPEAFEDLKVKEIKNGRLAMIAWLGFYVQAALTGKGPVQNFLDHISDPFHNNLLASLNFVKILN	340

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc241783g00013	340	Pfam	Chlorophyll A-B binding protein	131	306	IPR022796	-
	Stsc241783g00013	340	Gene3D	Chlorophyll a/b binding protein domain	121	333	-	-
	Stsc241783g00013	340	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	94	336	IPR001344	GO:0009765\|GO:0016020
	Stsc241783g00013	340	SUPERFAMILY	Chlorophyll a-b binding protein	113	332	-	-
	Stsc241783g00013	340	FunFam	Chlorophyll a-b binding protein, chloroplastic	121	333	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc241783g00013	Stsc-Chr241783	55672	58934	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc241783g00013	31	334	Chloroplast and Mitochondria Gene Families	AT1G76570	75.658	9.99e-174	483

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc241783g00013	K14172		-	gmx:100786260	545.428