Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241780g00012 ATGGACTATGCACGCTGGGTTGATGAGCATCAACGCTTGATTGGTGACCTCAGATCAGCCCTGAATTCTCAAATGGCTGATAATGAACTTAATCTTCTTGTTGATGGTGTCCTAGCACATCATGATGAACTGTTTCGGTTAAAAACCATAGCAGCCAAGGCTGATGTATTTCACATCCTTTCCGGAACATGGAAGACACCTGCAGAAAGATGCTTCATGTGGATAGGTGGATTCCGTCCATCCGAGCTTCTTAAGATTGTTAGGAACCATCTGGAGCCGTTAACAGATGAGCAATTGATGGGAATTTATAATTTGCAGCAGTCTTCTCAGCAGGCTGAGGATGCTTTATCTCAAGGAATGGAAGCATTGCATCAATCGCTTTCCGAAACGCTTGCCTCGACCTCCCTAGGTCCCACCACTTCTGGAAATGTTGCTCAGTACATGGGCCTAATGGCTGTTGCAATGGGCAAACTTGCCACACTTGAGAATTTCCTTCATCAGGCTGACCTTTTGAGGCAACAAGCACTGCAACAGCTGCAACGAATCTTGGCGACGCATCAAGCTGCTCGCGCTCTCTTAGTCATAAACGATTACATCTCGCGGCTTCGGGCACTTAGTTCGTTATGGCTAGCCTGCCCTAAAGAGTAG 648 0.4691 MDYARWVDEHQRLIGDLRSALNSQMADNELNLLVDGVLAHHDELFRLKTIAAKADVFHILSGTWKTPAERCFMWIGGFRPSELLKIVRNHLEPLTDEQLMGIYNLQQSSQQAEDALSQGMEALHQSLSETLASTSLGPTTSGNVAQYMGLMAVAMGKLATLENFLHQADLLRQQALQQLQRILATHQAARALLVINDYISRLRALSSLWLACPKE 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241780g00012 215 ProSiteProfiles DOG1 domain profile. 1 212 IPR025422 GO:0006351|GO:0043565
Stsc241780g00012 215 PANTHER TRANSCRIPTION FACTOR TGA9 1 214 - -
Stsc241780g00012 215 Pfam Seed dormancy control 14 88 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241780g00012 Stsc-Chr241780 47983 48904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241780g00012 1 215 bZIP Transcription Factor Family AT1G68640 73.488 5.08e-107 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241780g00012 K14431 - gmx:100775783 338.191