Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241778g00004 ATGGAAGAGGAAGCAGCTTCTGGGGCCTGGCTGATAATAATAATCCTTCTTCTCTTCTCCTTTCTTTTTCTTGCTAAATTCATACTTGAAAGAAACAAAAACCTACCACCAAGTCCACCATCTCTACCAATCATAGGCCACCTTCATCTCATAAAACAACCCTTACACCGAAGCCTTAACAGCCTCACACAGAAATATGGGCACATGGTGTTCCTCAAACTTGGAACACGCAAGGCACTTGTTGTGTCTTCACCTGAAGCTGTTGAAGAATGTCTCACAAAGAATAATGATATCATTTTTGCAAACCGTCCCAAAACACTTGCTGGGAAGCATCTCAACTACAATAATAAGACTATGGGATTTGCTCCCTATGGCGACCATTGGCGCGGCCTCCGCCGTCTAACTACTCTTGAGCTCTTCTCCGCCAACCGTCTTGCCATGCTTGCTAGAGTCCGAGAGGAAGAGGTTCACTTGTTGGTCAAACAACTCTTTGAAGATTGCAAAGGTCATCAAAACTTGAAGGTAGAACTTAGGCCGAGATTTATGGAGCTTTCTTTCAATATCATGCTGAGAATGATATCTGGGAAGCGTTACTATGGAAAGGATATTGACGAAGAAGGAAAAGAGTTCCAGATTCTAGTAAAGGAGATGGCGGAGCTTCTTGGTAGTGGGAACTTGAATGACTTCATTCCACTACTAAAATGGGTTGATTTCCAAAGTATGGAAAAGAGGATGGTGAGCTTGATGAAAAAGGTGGATAACTTCTTACAGAAGCTACTTGATGATCATAGAAGAAATAGGAGCATCAAAGGAAACCAAGAAAACAATATGAATCTCAATTTAATTGATGTCATGTTGGATCTTCAACACAAGGATCCTGAATTCTACACGCATGAAACTGTCAAAGGAGTCATCGTGGCAATGCTCACAGCTGGGTCCGACACTACAGCTATTACTCTGGAATGGGCAGCCTCACTTCTCCTCAACAACCCTAAAACTATGAAGAAACTTGAAGATGAGTTACACACTTACGGAGGCCATGATCAACTCTTGAATGAATCAGAAGCAGCCAAACTCAAGTACCTTCAAAACGTTATAACCGAGACTCTTCGTCTTTACCCTGCGGCTCCACTTCTTCTACCTCACGAGAATTCAAATGATTGCAAAGTTTGTGGCTATGACATACCAAAAGGGACAATGCTGTTTGTGAATTTGTGGACACTACAAAGAGACCCTAATTTGTGGGTGGATCCTACAAAGTTTGTGCCGGAGAGATTTGAGGGAGATGGCGGTGGTGGCGGTGATCACGGTGGCGTAGTTTATAATGTGATTCCATTTGGTGTTGGAAGACGAGCTTGCCCCGGAGGTGTTTTGGCAAAACGTGTTATGGGACATGCATTGGGAGCTTTGATTCAATGTTTTGAGCTGGACAAAATTGGAAATGAAGAAATTAATATGAAGGAAGGAGTAGGTCTTACCATGCCCAAGGTTGAACCTTTGGTTGCTTTATGCAGGCCACGCCAGCAAATGCTTAAGGTTCTCTCCAATATATAA 1554 0.4286 MEEEAASGAWLIIIILLLFSFLFLAKFILERNKNLPPSPPSLPIIGHLHLIKQPLHRSLNSLTQKYGHMVFLKLGTRKALVVSSPEAVEECLTKNNDIIFANRPKTLAGKHLNYNNKTMGFAPYGDHWRGLRRLTTLELFSANRLAMLARVREEEVHLLVKQLFEDCKGHQNLKVELRPRFMELSFNIMLRMISGKRYYGKDIDEEGKEFQILVKEMAELLGSGNLNDFIPLLKWVDFQSMEKRMVSLMKKVDNFLQKLLDDHRRNRSIKGNQENNMNLNLIDVMLDLQHKDPEFYTHETVKGVIVAMLTAGSDTTAITLEWAASLLLNNPKTMKKLEDELHTYGGHDQLLNESEAAKLKYLQNVITETLRLYPAAPLLLPHENSNDCKVCGYDIPKGTMLFVNLWTLQRDPNLWVDPTKFVPERFEGDGGGGGDHGGVVYNVIPFGVGRRACPGGVLAKRVMGHALGALIQCFELDKIGNEEINMKEGVGLTMPKVEPLVALCRPRQQMLKVLSNI 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241778g00004 517 FunFam Cytochrome P450 family protein 28 510 - -
Stsc241778g00004 517 CDD CYP81 67 500 - -
Stsc241778g00004 517 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241778g00004 517 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241778g00004 517 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241778g00004 517 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241778g00004 517 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241778g00004 517 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241778g00004 517 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241778g00004 517 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241778g00004 517 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241778g00004 517 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241778g00004 517 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241778g00004 517 SUPERFAMILY Cytochrome P450 36 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241778g00004 517 Gene3D Cytochrome P450 28 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241778g00004 517 PANTHER CYTOCHROME P450 82C3-RELATED 14 508 - -
Stsc241778g00004 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Stsc241778g00004 517 Pfam Cytochrome P450 36 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241778g00004 Stsc-Chr241778 7931 11122 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241778g00004 15 516 Cytochrome P450 AT4G37360 45.809 3.92e-157 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241778g00004 - - gmx:100794610 700.279