Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241777g00008 ATGGCAACAAGTTCTAATAACGAAGGATCAAAGAGTGGAGTATCCATGAATATTTCTAGAAGAAATTCATCATCATCGGAAAGAAAGAAGAAAGGTGGTGAAGGCGATGAAGATGGTTTAGGGTTTAAAAGAAAACTCAGATTTTGGTTTGGTTGCATGGCACTCAGATCTAAACCAAAAGATTCTTATGAGACTCACAAATACAAAGAACATGGAGTAGAGGAGAAAATTGCTATCACATCATCAATTACAAGCAATAATAATTCACCAATAACTGATCATGGGGCTGGTGAAACTACCACCATCACTACTACTACTACTAATGCTACTAGAATTGTAAGTGAAGAAGAAAGGGCTTATCCAAATCTTAGAAGCTTCAGATACAAAGACCTAAAGTTGGCAACGAGGAATTTCAAGAGAGAGCATTTTCTTGGAGAGGGAGGATTTGGAAGTGTCTACAAAGGATGGCTTAGTAGAGATGATCATATGACTCCATCAAGGCCTGCATTTGGCTTCCCTGTTGCTATCAAATCTCTTAACCAATTTGGTCTTCAAGGCCATGAAGAATGGCTTGCTGAAGTTAATTATCTGAGTCAGCTGGAACATCCAAATTTGGTGAAACTGATTGGATTTTGCAATGAGGGTGATTATAGGCTGCTTGTTTATGAGTTCATGCCTCGTGGAAGCCTTGAATCCCATCTCTTTAGGCGAGCAGTGGTGTTTCCGTGGTGCACAAGAATGAGAATAATGCTTGATGCTGCAAAGGGGCTTGCATATCTTCATGAGAAGACTGAAAACAAGAATGCAGTCATTTTCCGTGACTTCAAGAGTTCTAATATACTCTTGGATAGGGATTTGAATGCAAAACTATCTGATTTTGGTTTTGCAAAGGATGGACCTGAGGGAGATAGAACTCACATATCAACTAGAGTCATGGGAACACAAGGCTATGCTGCTCCCGAATATGTCATGCGTGGGCATCTAAGCGCGAAAAGTGACGTGTACAGCTTCGGAGTAGTAATGCTAGAGATGGTAACAGGAAGGAAGGTGATAGACAGGCTAAGGCCATATAATGAGATGAACTTGGTGAATTGGGCACTGCCCTTAATAATGGACAATGCAAGGAACTGCCACAATGTCTTGGTAGATCCAAGGCTTCATGGCCAATACTCTAAAAAGGCTTCAGTTAAGGCACTTAAGTTGGCCTCTCACTGCCTTCGCTTCAACCCTTCACTCAGACCTTCCATGGCTTCTGTTGTTCAAACCATTTCCAACTTCCCTCAGGAGGCTTCACCTCTTCCAATTCCTCCTCCTCCTAGTCTTGCCACCACCACCGCCGCCACTATTAATAATAGTAACCACAACAAATATGGTCTTGTTCTTCCTTCTTCTTCTGATGCTTCTGGTTCTGGTTCTACTTCAAGGAACAGCAATGTGCCGAGTCGGTTCCGGGCTTCCCCGTACCACCCCAACAATCAGCAGCACCACCACCACCAACACCAACCTCATGTTGCTGATGTTGCTTCAACTTCATCATCAACACCAAGGCGTAATTCTAGAATTGATCAAAGGCGTTGA 1578 0.4265 MATSSNNEGSKSGVSMNISRRNSSSSERKKKGGEGDEDGLGFKRKLRFWFGCMALRSKPKDSYETHKYKEHGVEEKIAITSSITSNNNSPITDHGAGETTTITTTTTNATRIVSEEERAYPNLRSFRYKDLKLATRNFKREHFLGEGGFGSVYKGWLSRDDHMTPSRPAFGFPVAIKSLNQFGLQGHEEWLAEVNYLSQLEHPNLVKLIGFCNEGDYRLLVYEFMPRGSLESHLFRRAVVFPWCTRMRIMLDAAKGLAYLHEKTENKNAVIFRDFKSSNILLDRDLNAKLSDFGFAKDGPEGDRTHISTRVMGTQGYAAPEYVMRGHLSAKSDVYSFGVVMLEMVTGRKVIDRLRPYNEMNLVNWALPLIMDNARNCHNVLVDPRLHGQYSKKASVKALKLASHCLRFNPSLRPSMASVVQTISNFPQEASPLPIPPPPSLATTTAATINNSNHNKYGLVLPSSSDASGSGSTSRNSNVPSRFRASPYHPNNQQHHHHQHQPHVADVASTSSSTPRRNSRIDQRR 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241777g00008 525 ProSitePatterns Protein kinases ATP-binding region signature. 144 177 IPR017441 GO:0005524
Stsc241777g00008 525 PANTHER OS01G0588500 PROTEIN-RELATED 73 424 - -
Stsc241777g00008 525 Gene3D Transferase(Phosphotransferase) domain 1 225 432 - -
Stsc241777g00008 525 SUPERFAMILY Protein kinase-like (PK-like) 120 452 IPR011009 -
Stsc241777g00008 525 FunFam Serine/threonine-protein kinase BIK1 104 224 - -
Stsc241777g00008 525 MobiDBLite consensus disorder prediction 457 525 - -
Stsc241777g00008 525 MobiDBLite consensus disorder prediction 1 38 - -
Stsc241777g00008 525 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 225 433 - -
Stsc241777g00008 525 MobiDBLite consensus disorder prediction 457 490 - -
Stsc241777g00008 525 MobiDBLite consensus disorder prediction 23 38 - -
Stsc241777g00008 525 ProSiteProfiles Protein kinase domain profile. 138 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241777g00008 525 Gene3D Phosphorylase Kinase; domain 1 97 224 - -
Stsc241777g00008 525 CDD STKc_IRAK 144 423 - -
Stsc241777g00008 525 MobiDBLite consensus disorder prediction 1 22 - -
Stsc241777g00008 525 Pfam Protein kinase domain 139 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241777g00008 Stsc-Chr241777 47766 53806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241777g00008 124 449 Glycoside Hydrolase AT3G07070 47.761 1.31e-98 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc241777g00008 Pkinase 5.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241777g00008 - - adu:107471145 608.601