Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241772g00012 ATGTCCAAGCCAGCAGCAGATATCTTACAAAAGTTTTACCTTAAACTTCGAGATCATAATACATCAGCTGATGGCACTCCTATAACAGCAAGGCAACTGGAAAGTCTTGTAAGGTTGGCTGAAGCTCGAGCTCGACTGGATTTGAGAGAAGAAATAACAGCCCAAGATGCACTGGATGTTGTGGAAATTATGAAGGAATCTCTGTATGATAAATACGTTGATGAGCATGGTATTGTAGATTTCGGTCGAAGTGGGGGGATGAGTCAACAAAAGGAGGCAAAACGCTTTCTAAATGCCCTCAATAAGCAATCTGAACTAGAACAGAAAGATTGTTTTTCAGTATCGGAAATATATAGCCTCGCAGATAGGATTTCCTTGAAAGTTCCAGATATTGACACTTTCATCGAAAATTTAAACAGTGTTGGTTATCTGCTCAAGAAAGGACCAAAGACATACCAGGTGCTATCCTCTTCATACAGTCGAAGCCAATCATTTAGGTCTAGGGGCTAA 510 0.4039 MSKPAADILQKFYLKLRDHNTSADGTPITARQLESLVRLAEARARLDLREEITAQDALDVVEIMKESLYDKYVDEHGIVDFGRSGGMSQQKEAKRFLNALNKQSELEQKDCFSVSEIYSLADRISLKVPDIDTFIENLNSVGYLLKKGPKTYQVLSSSYSRSQSFRSRG 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241772g00012 169 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 1 106 IPR031327 GO:0003677|GO:0005524|GO:0032508
Stsc241772g00012 169 Gene3D - 1 78 IPR027417 -
Stsc241772g00012 169 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 74 IPR027417 -
Stsc241772g00012 169 Pfam MCM AAA-lid domain 1 68 IPR041562 -
Stsc241772g00012 169 CDD MCM8_WHD 90 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241772g00012 Stsc-Chr241772 47712 48758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241772g00012 1 155 Core DNA Replication Machinery Family AT3G09660 86.452 2.14e-92 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241772g00012 K10737 - gmx:100784549 277.715