Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241771g00002 ATGTTTCAGATCAAAGGACTATATAGAGGAGCAACATCATCTTTTTTGGGGATGGCTTGTGAAAGTTCACTTCTTTTTGGCATATATTCCCAGACAAAATTGGCTCTTCAGGGAGGTGTTCAAAGTGGTAAACCGCAGCCTCAAGTGATAATACCATCTGCAGCTTATGGCGGTGCCATCATCAGTTTTGTGTTATGTCCAACGGAGCTGGTAAAGTGTAGGATGCAGATTCAAGGGACTGACTCTTTGGTTCCAAAGTCGAGTAGATACAGTAGTTCTCTTGATTGTGCCCTTAAAACTGTGAAAAGTGAAGGGGTGACAGGAATTTTTCGCGGAGGTTTTACGACATTGCTTAGAGAATCAATAGGGAATGCTGTCTTTTTCAGCACATATGAATACGTGCGCTATCACTTGCATTCACATGCCAAAGCTGTTCCTTCCAATTACAACAACCTGGTTGATATTGGCATTGGGATTATTACTGGTGGTCTTGGTGGTGTGTCTTTTTGGTTGGCTGTTCTGCCCCTTGATGTGGCAAAGACTTTAATTCAGACAAACCCCGAAAGAAACGGTTCACGAAATCCTTTTCAGGTCCTGAGTTCGGTTTACAAGAGCGGTGGCTTGAAGGGTTGTTATACAGGTCTGGGGCCAACAGTAACCCGAGCATTCCCTGCTAATGCAGCCGCAATTGTGACCTGGGAGCTAGCAATGAAAATGTTAGGCATTAGGCATGAGTGA 738 0.4417 MFQIKGLYRGATSSFLGMACESSLLFGIYSQTKLALQGGVQSGKPQPQVIIPSAAYGGAIISFVLCPTELVKCRMQIQGTDSLVPKSSRYSSSLDCALKTVKSEGVTGIFRGGFTTLLRESIGNAVFFSTYEYVRYHLHSHAKAVPSNYNNLVDIGIGIITGGLGGVSFWLAVLPLDVAKTLIQTNPERNGSRNPFQVLSSVYKSGGLKGCYTGLGPTVTRAFPANAAAIVTWELAMKMLGIRHE 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241771g00002 245 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 240 - -
Stsc241771g00002 245 FunFam Mitochondrial amino acid carrier 120 244 - -
Stsc241771g00002 245 Gene3D Mitochondrial carrier domain 2 244 IPR023395 -
Stsc241771g00002 245 SUPERFAMILY Mitochondrial carrier 4 234 IPR023395 -
Stsc241771g00002 245 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Stsc241771g00002 245 Pfam Mitochondrial carrier protein 53 139 IPR018108 -
Stsc241771g00002 245 Pfam Mitochondrial carrier protein 159 240 IPR018108 -
Stsc241771g00002 245 ProSiteProfiles Solute carrier (Solcar) repeat profile. 45 137 IPR018108 -
Stsc241771g00002 245 ProSiteProfiles Solute carrier (Solcar) repeat profile. 153 239 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241771g00002 Stsc-Chr241771 21080 25534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241771g00002 1 240 Antiporters AT1G79900 32.271 1.48e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241771g00002 K15109 - gmx:100815087 392.889