Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241769g00006 ATGGTGCCAGAGTTTCAACTTCTTTTCTTTCCTAACCTTGTCCAGTCACCTATCTTGACTTTCCATGCTGCTATTCTTGCTCTACTCTTTGTGTTGGCTTGTTTCCTTTGGCTTTCTCCTGGTGGGCTTGCATGGGCCGTAACCAAGTCCGTTGGGGGCACTGAAACGGCTATTCCCGGTCCATCAGGCCTACCTCTGCTTGGGCTCCTCCGTGTCTTCACAGGAGAGACGCCGCACCGTGTACTTGCAAAGCTGGCCAAAACTTTCCAAGCTGGAAAACTCATGGCCTTTTCTGTTGGCTTAACCCAGTTCATCATTTCAAGCGAGCCGGAAACTGCGAAAGAGATTTTGGGAAGTGCAGATTTTGCTGACAGGCCTGTGAAAGAATCGGCTTACGAGCTTCTCTTTCACAGGGCAATGGGGTTCGCACCATACGGAGATTACTGGAGGAATCTTAGGAGGATCTCATCGACCCACTTGTTTTGTCCAAAGAGGCTCACGGGCTTTGAAGAATTCAGGCACTCCATTGGATTGAACATGGTGAAAGAGTTCAAATCCATGATGAGTGACAAGGGTCAGGTTGAGGTGAAAAAGGTTCTTCATTTTGGGTCCTTAAACAATGTAATGATGATGGTGTTTGGGAAGTGCTATGATTTTTTGAATGATGATGGTGTTATACTTGAAGAGCTTGTTAGTGAAGGGTATGAGTTGTTGGGTGTCTTTAACTGGAATGACCATTTTCCTCTTCTTGGGTGGATGGACCTTCAAGGTGTGAGGAGAAGGTGTAGGTGTTTGGTTTCAAAGGTGAATACTTTTGTTGGGAAGATTATAGAGGATCATAGGGTGAAGAGGGTTTCAGGTGAGTATGTTGCTAGTGAAACAGTTGGAGATTTTGTTGATGTCTTGCTTGATTTGGAGAAAGAAAACAAGCTCACTGATGGTGACATGATTGCTGTTCTTTGGGAAATGATTTTCAGAGGAACAGATACAGTGGCTATTTTACTGGAATGGGTTCTTGCAAGAATGGTTCTTCACCCAGAGATGCAAACCAAGGCACAGCGTGAAATTGATGAAGTTGTTGGGTCAAGGCCAGTTTCTGATAGTGACATACCCAACCTGCCTTACTTGCAGTGCATTGTGAAGGAGACCCTAAGGGTGCACCCACCTGGTCCATTGCTTTCCTGGGCCAGACTTGCTATACACAATGTCTATATTGGTGAAAAGCTTATACCGGCAGGAACCATCGCGATGATTAACATGTGGGCTATAACTCATGATGCAAATGTGTGGTCCGAACCTGATATGTTCAAGCCCGAGAGATTTATGGAAATGGAAAGAGATATGAACATCATGGGTTGTGATCTTAGGCTCGCTCCATTTGGAGCAGGGAGGAGGGTTTGCCCTGGGAAGTCCATGGGACTGGCTTCTGTTCACCTTTGGTTTGCTCAGCTTCTCCAGTGCTTTCAATGGTTTCCCTGTGAAGAAAAGCCTGTGGATTTGTCTGAGTGCCTCAAGCTTTCAATGGAGATGAAATCACCACTTATTTGCAAAGCTGTTCCTAGGGTTGTTGCTTGA 1575 0.4571 MVPEFQLLFFPNLVQSPILTFHAAILALLFVLACFLWLSPGGLAWAVTKSVGGTETAIPGPSGLPLLGLLRVFTGETPHRVLAKLAKTFQAGKLMAFSVGLTQFIISSEPETAKEILGSADFADRPVKESAYELLFHRAMGFAPYGDYWRNLRRISSTHLFCPKRLTGFEEFRHSIGLNMVKEFKSMMSDKGQVEVKKVLHFGSLNNVMMMVFGKCYDFLNDDGVILEELVSEGYELLGVFNWNDHFPLLGWMDLQGVRRRCRCLVSKVNTFVGKIIEDHRVKRVSGEYVASETVGDFVDVLLDLEKENKLTDGDMIAVLWEMIFRGTDTVAILLEWVLARMVLHPEMQTKAQREIDEVVGSRPVSDSDIPNLPYLQCIVKETLRVHPPGPLLSWARLAIHNVYIGEKLIPAGTIAMINMWAITHDANVWSEPDMFKPERFMEMERDMNIMGCDLRLAPFGAGRRVCPGKSMGLASVHLWFAQLLQCFQWFPCEEKPVDLSECLKLSMEMKSPLICKAVPRVVA 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241769g00006 524 FunFam Cytochrome P450 78A5 50 521 - -
Stsc241769g00006 524 Gene3D Cytochrome P450 48 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241769g00006 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Stsc241769g00006 524 PANTHER CYTOCHROME P450 78A7-RELATED 18 521 - -
Stsc241769g00006 524 CDD CYP78 91 514 - -
Stsc241769g00006 524 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241769g00006 524 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241769g00006 524 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241769g00006 524 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241769g00006 524 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241769g00006 524 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241769g00006 524 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241769g00006 524 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241769g00006 524 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241769g00006 524 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241769g00006 524 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241769g00006 524 Pfam Cytochrome P450 59 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241769g00006 524 SUPERFAMILY Cytochrome P450 58 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241769g00006 Stsc-Chr241769 35005 36858 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241769g00006 1 524 Cytochrome P450 AT1G13710 64.353 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241769g00006 K20619 - qsa:O6P43_032897 747.658