Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241767g00019 ATGATGACGAAGAGGAAAAGCCAGGGGAGGATTGCGAAGGAGAGGAGCAAGTTCACGATGAAGAAAGGCACTCTTTCAACCACCTCCCACCTTCAGCTTCACCCAGGGCAAGTCTCTCTCTTCCCCTTCCTTAATCCTCCTTCTTCCTCCTCTTCTGTTTCCGCTCCTTCTTCCCGCCTTCTTGATGCTGAATCTCACCGCCCAAACCCTCCCGCTTCTTCCTCCCACCCATCGGCGCTCGCCGACAACGACGCCCCCGACGACAGAGACTGTATTCTTAGCCAGGACTTCTTTTGCACTCCGGATTATATTACGCCGGATAATCAGAACATTCTCAACGCCTTGGATTTCAATAAGGAGAATACACCTTGCCCTAAATCCCCGGAGAAGCTCAACACTACAAAAAGCAAGAGGTGCCGATTGGATGCTATCTCAGTAAATCCTCTCAGCCCAAACTTTTCTAATGACAATCAACAAGTTGTTGAGCTTGGTAAGGACTCTGTTATGGAGGAAATAGCTGCTGAGAAAACAGTACCAGCTGATACACCAAAGCCCCAAAATTATGTGTCTCAATCTGCAGTTGCATTGCGCTGCAGGGTTATGCCTCCTCCCTGCATCCAGAATCCCTATTTGAAAGATGTTTCAGAAAAGGAGACAGACCCCTTTGGAAACCAAAGGTTAAAATGTGCAGGTCTATTCCCTGCAATAACTGGTGATGATGGTTTTTCACGCTATCGCAATGATTTTCATGAGATTGAGCAAATTGGCAGAGGGCACTTTAGTAGTGTTTTCAAAGTATTAAAACGAATAGATGGTTGCCTTTATGCTGTGAAACGCAGTGCCAGACAGTTGCGTCTGGAAACAGAGAGGAGGAAAGCTTTGATGGAAGTTCAAGCATTGGCTGCATTAGGTTCTCATGCAAACATAGTGGGGTACTATTCTTCATGGTTTGAAAATGAACAGCTGTATATCCAGATGGAGCTTTGTGATCACAGCTTATCCATAAAGAAATGCTCTGCTTCCTTCACAGAAGGACAAGTGTTAGAGGCTCTATATCAGGTTGCCAATGCACTGAAATTTATTCACGAGAAGGGAATAGCACATTTAGATGTTAAGCCTGATAATATTTATGTAAAAAATGGTGTATATAAACTTGGTGATTTTGGATGTGCAACTCGCCTTGACAATAGCCTCCCAGTTGAGGAGGGAGATGCACGTTATATGCCTCAAGAAATCCTTAATGAGAATTATGATCACCTTGACAAAGTTGATATCTTTTCTTTGGGAGCTTCTATGTATGAGTTCATCCGGCAATTGCCTTTGCCAGAATCAGGATGTCAATTTTTTAATCTTAAAGAGGGAAAGCTACCACTTTTGCCTGGCCACTCATTACAATTCCAAAACTTGCTCAAGGCCATGATGGACCCTGATCCAGTTAAACGTCCTTCTGCTGGGGAGTTGATAGAGAATCCAATTTTCGACAAGGTCATTAGAACTAATTGA 1503 0.4398 MMTKRKSQGRIAKERSKFTMKKGTLSTTSHLQLHPGQVSLFPFLNPPSSSSSVSAPSSRLLDAESHRPNPPASSSHPSALADNDAPDDRDCILSQDFFCTPDYITPDNQNILNALDFNKENTPCPKSPEKLNTTKSKRCRLDAISVNPLSPNFSNDNQQVVELGKDSVMEEIAAEKTVPADTPKPQNYVSQSAVALRCRVMPPPCIQNPYLKDVSEKETDPFGNQRLKCAGLFPAITGDDGFSRYRNDFHEIEQIGRGHFSSVFKVLKRIDGCLYAVKRSARQLRLETERRKALMEVQALAALGSHANIVGYYSSWFENEQLYIQMELCDHSLSIKKCSASFTEGQVLEALYQVANALKFIHEKGIAHLDVKPDNIYVKNGVYKLGDFGCATRLDNSLPVEEGDARYMPQEILNENYDHLDKVDIFSLGASMYEFIRQLPLPESGCQFFNLKEGKLPLLPGHSLQFQNLLKAMMDPDPVKRPSAGELIENPIFDKVIRTN 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241767g00019 500 Gene3D Phosphorylase Kinase; domain 1 239 327 - -
Stsc241767g00019 500 MobiDBLite consensus disorder prediction 42 59 - -
Stsc241767g00019 500 SUPERFAMILY Protein kinase-like (PK-like) 244 495 IPR011009 -
Stsc241767g00019 500 SMART serkin_6 249 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241767g00019 500 Pfam Protein kinase domain 249 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241767g00019 500 MobiDBLite consensus disorder prediction 1 86 - -
Stsc241767g00019 500 MobiDBLite consensus disorder prediction 21 35 - -
Stsc241767g00019 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 366 378 IPR008271 GO:0004672|GO:0006468
Stsc241767g00019 500 FunFam Wee1-like protein kinase 328 497 - -
Stsc241767g00019 500 ProSiteProfiles Protein kinase domain profile. 249 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241767g00019 500 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 57 492 - -
Stsc241767g00019 500 Gene3D Transferase(Phosphotransferase) domain 1 328 498 - -
Stsc241767g00019 500 ProSitePatterns Protein kinases ATP-binding region signature. 255 278 IPR017441 GO:0005524
Stsc241767g00019 500 FunFam WEE protein kinase 239 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241767g00019 Stsc-Chr241767 91915 94987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241767g00019 1 496 Core Cell Cycle Gene Families AT1G02970 60.600 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Stsc241767g00019 Pkinase 8.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241767g00019 K06632 - gmx:547742 745.732