Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241767g00015 ATGGACTTCCCGAACGACGATTTCCTTGAGCTGCCGATTGGGAACTCCGCCGAGTCGTTGCAGAGGTTTTTGGCTTCGCAGAGAGACCTCTTCCACAGCCAGATCGATCAGTTTCAGGAAATCGTCGTGACGCAATGCAAACTCACCGGCGTCAATCCTCTCTCTCAAGAAATGGCAGCCGGTGCTCTTTCAATAAACATTGGTAAAAGACCAAGGGATTTATTAAATCCAAAGGCTGTTAATTACATGCAATCTGTTTTTTCTATTAAGGATGCAATCAGCAAGAAAGAATCTCGAGAGATTAGTGCTTTATTTGGTGTCACAGTAACACAGGTGCGTGACTTTTTCAATGGTCAACGCTCTAGAGTGAGGAGATTTGTTCTGTTGTCAAGGGAGAAAGCATTAAAATCTAATTCTCTTGAAGAACCTCATGATGGGCTAATAAACTCTGATCCTATGAGACCAATAAATCCAGCTCCTTTAAATTCTATCATGCCCAGCAATGCTGAAAACGCATCTTGTTCAACGCAGGAAGCGGCTTTGTCTGACCTAGATGACTTAGATAAGAAATTTGTTGATAATATTTTTAGTCTAATGGAGAAGGAGGAGTCATTTTCTGGGCAGGAGAAACTGATGGAGTGGATATTGACAATACAGAACTTTTCAGTATTATTGTGGTTTCTAACCAGAGGAGGTGTGATGATTTTAGCAACTTGGTTGAGTGTAGCGGCTGTTGAAGAGCAAACAAGTGTCCTTCTTCTTATCTTGAAGGTTCTTTGCCATTTGCCTTTACATAAAGCCCTCCCGACACACATATCAGCTATATTACAGTGTGTTAATAGATTGCGGTTCTACAGGACATCAGACATATCAAACAGGGCAAGGGTTTTGTTATCTAAGTGGAGCAAATTATTAGCAAGGGACCAAGCAATGAAGAAACCCAATGGTGTTAAGCTTTCTAATGATGGTCTAAAAGAGAGAGTGTTTTCTCAGAGTTTGCATTTTTCCTTAATCATTCATTCATGTTTTCAGGAAGACATACTTGCTCTTTCTAATGATCATTCAGATAATCTCAGGAAACTGGAACCTTCCCAATCTTTGAAATTGTTGCCATCCAGCTCAGATGATTCTCATAAGAAGCTTGCTCTTGGTGTATCTTCATCTCAATCAAATGGCCCTAGAGAGCGCAGAAAAGTGCAACTGGTGGAGCAACCAGGCCAAAAATCAGTGACCAGAAGCCCACAGGCAACAAGAGTAGCCCCTGTAAATCAAGGCCGTCCTATGTCTGCTGATGATATACAGAAAGCAAAAATGCGTGCTTTATTCATGCAGAGTAAGTATGCAAAAAATGGGTCTTCCAAGGAAAGTAAAGATGCGAAGATTGATGGTTTGCATAAGCGTCAGACAAATCAGGCCAGTATTGCAGCTTGCTCTGCTAAAGTTCCTGTTCCTCCCAAAATTGAAGATGACAAAAAAACGTCATTGCTTCCCTCTAGTAAGATCACTAATAAGCCGGAAGCATCTTATTCTAAAACAAGAATGGATGCAAATGAACCGGTGTGGGAGAAGTGCAAGAGGGTGCAAATCCCATGGAAGACACCAGCAGGTACATTTGCATCTTTTTTATTGGTTCCCTCAATTATATGCCTAAAGTCTTTTGGATACAAAAAATGGTTAAACACTTGA 1686 0.4104 MDFPNDDFLELPIGNSAESLQRFLASQRDLFHSQIDQFQEIVVTQCKLTGVNPLSQEMAAGALSINIGKRPRDLLNPKAVNYMQSVFSIKDAISKKESREISALFGVTVTQVRDFFNGQRSRVRRFVLLSREKALKSNSLEEPHDGLINSDPMRPINPAPLNSIMPSNAENASCSTQEAALSDLDDLDKKFVDNIFSLMEKEESFSGQEKLMEWILTIQNFSVLLWFLTRGGVMILATWLSVAAVEEQTSVLLLILKVLCHLPLHKALPTHISAILQCVNRLRFYRTSDISNRARVLLSKWSKLLARDQAMKKPNGVKLSNDGLKERVFSQSLHFSLIIHSCFQEDILALSNDHSDNLRKLEPSQSLKLLPSSSDDSHKKLALGVSSSQSNGPRERRKVQLVEQPGQKSVTRSPQATRVAPVNQGRPMSADDIQKAKMRALFMQSKYAKNGSSKESKDAKIDGLHKRQTNQASIAACSAKVPVPPKIEDDKKTSLLPSSKITNKPEASYSKTRMDANEPVWEKCKRVQIPWKTPAGTFASFLLVPSIICLKSFGYKKWLNT 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241767g00015 561 Gene3D - 68 125 - -
Stsc241767g00015 561 MobiDBLite consensus disorder prediction 368 428 - -
Stsc241767g00015 561 SMART HOX_1 68 130 IPR001356 GO:0003677
Stsc241767g00015 561 MobiDBLite consensus disorder prediction 496 510 - -
Stsc241767g00015 561 MobiDBLite consensus disorder prediction 404 422 - -
Stsc241767g00015 561 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Stsc241767g00015 561 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 106 535 - -
Stsc241767g00015 561 MobiDBLite consensus disorder prediction 379 395 - -
Stsc241767g00015 561 MobiDBLite consensus disorder prediction 485 511 - -
Stsc241767g00015 561 SUPERFAMILY Homeodomain-like 68 129 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241767g00015 Stsc-Chr241767 62485 66748 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241767g00015 10 449 Homeobox Transcription Factor Family AT4G02560 60.714 8.39e-174 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241767g00015 - - adu:107492506 882.863