Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241767g00014 ATGGACTTCCCGAACGACGATTTCCTTGAGCTGCCGATTGGGAACTCCGCCGAGTCGTTGCAGAGGTTTTTGGCTTCGCAGAGAGACCTCTTCCACAGCCAGATCGATCAGTTTCAGGAAATCGTCGTGACGCAATGCAAACTCACCGGCGTCAATCCTCTCTCTCAAGAAATGGCAGCCGGTGCTCTTTCAATAAACATTGGTAAAAGACCAAGGGATTTATTAAATCCAAAGGCTGTTAATTACATGCAATCTGTTTTTTCTATTAAGGATGCAATCAGCAAGAAAGAATCTCGAGAGATTAGTGCTTTATTTGGTGTCACAGTAACACAGGTGCGTGACTTTTTCAATGGTCAACGCTCTAGAGTGAGGAGATTTGTTCTGTTGTCAAGGGAGAAAGCATTAAAATCTAATTCTCTTGAAGAACCTCATGATGGGCTAATAAACTCTGATCCTATGAGACCAATAAATCCAGCTCCTTTAAATTCTATCATGCCCAGCAATGCTGAAAACGCATCTTGTTCAACGCAGGAAGCGGCTTTGTCTGACCTAGATGACTTAGATAAGAAATTTGTTGATAATATTTTTAGTCTAATGGAGAAGGAGGAGTCATTTTCTGGGCAGGAGAAACTGATGGAGTGGATATTGACAATACAGAACTTTTCAGTATTATTGTGGTTTCTAACCAGAGGAGGTGTGATGATTTTAGCAACTTGGTTGAGTGTAGCGGCTGTTGAAGAGCAAACAAGTGTCCTTCTTCTTATCTTGAAGGTTCTTTGCCATTTGCCTTTACATAAAGCCCTCCCGACACACATATCAGCTATATTACAGTGTGTTAATAGATTGCGGTTCTACAGGACATCAGACATATCAAACAGGGCAAGGGTTTTGTTATCTAAGTGGAGCAAATTATTAGCAAGGGACCAAGCAATGAAGAAACCCAATGGTGTTAAGCTTTCTAATGATGGTCTAAAAGAGAGAGTGTTTTCTCAGAGTTTGCATTTTTCCTTAATCATTCATTCATGTTTTCAGGAAGACATACTTGCTCTTTCTAATGATCATTCAGATAATCTCAGGAAACTGGAACCTTCCCAATCTTTGAAATTGTTGCCATCCAGCTCAGATGATTCTCATAAGAAGCTTGCTCTTGGTGTATCTTCATCTCAATCAAATGGCCCTAGAGAGCGCAGAAAAGTGCAACTGGTGGAGCAACCAGGCCAAAAATCAGTGACCAGAAGCCCACAGGCAACAAGAGTAGCCCCTGTAAATCAAGGCCGTCCTATGTCTGCTGATGATATACAGAAAGCAAAAATGCGTGCTTTATTCATGCAGAGTAAGTATGCAAAAAATGGGTCTTCCAAGGAAAGTAAAGATGCGAAGATTGATGGTTTGCATAAGCGTCAGACAAATCAGGCCAGTATTGCAGCTTGCTCTGCTAAAGTTCCTGTTCCTCCCAAAATTGAAGATGACAAAAAAACGTCATTGCTTCCCTCTAGTAAGATCACTAATAAGCCGGAAGCATCTTATTCTAAAACAAGAATGGATGCAAATGAACCGGTGTGGGAGAAGTGCAAGAGGGTGCAAATCCCATGGAAGACACCAGCAGAAGTGAAACTCAGAGATACATGGAGTGTGGGTGCTGGTGAAAATAGCAAAGAGGTTGATGTCCAGAAAAACAGAAACCGCAGGGAGAAGGAAACTGTTTATCAGACTGTCCAAGAGATACCATCTAATCCCAAAGAGCCATGGGACCTCGAGATGGACTATGATGACACTTTGACACTGGAAATTCCCATCGAACAGCTGCCGGATGTTGATGGCGCAGAACTAACAGTTGCCCCCGAGGTTGCAACTCATGCTGTTCATGGGGTGGCCACAACATCTTCAACCAGTAATGTAGCTGATACTGCTCAACCTGACTTGGAACTGCTAGCAGTGTTACTTAAAAATCCAGATTTGGTATTTGCCTTAACTTCGGGACAAGGTGGCATCCAAAGTGAGGAAACCGTGAAGGTACTTGACATGATCAAGAGAGGTGGTTTGAACTTGGGTACAAATGATACAAATCATGGCAATGGCAATGGCATTAGTGCAAAGACCACAGAGACAGTGGAAGTTTCACTCCCCTCGCCAACTCCTTCAAGTGATCCAAGAACGAGTGGATGGAGCACAGTACCACCAAAGAATCCATTTTCACGGCAAAGCTTAGAATCTGCTAGAAGCTACCCTGCAGTGGCAACTACCAACTTAATATCTCAAGTTCCAGCCACCGGCACTACAGTACTAAGGCAGCAGCCGGCAATGGCGCTTCCATCTTCAAATCCCTTTACCAGCACAGTAGTTTCCTCATATTCACTGCCTCAGGCAACTAATTTACCCGAGACTGAGCGGCAACCACCCCTTGCTCTTTCCTCTATGCATGTACAACAAACACCACTCTCAGATATAGGTTTAACCATGAAGAACATAACGAGTACAAATCCATCTTCGGTTAACTTAGCCGGGGCATATTCGCCTTTAGCGATGCAGGTCAACGGCACCAGTAATGTAAAACCAGTACCTAATATGAGTGTTGAAGACGGTTTGTCTAATTCATTTCCCCAATCCTTCAGGTTGGCCTCCACAACCCCTACACTTTCAACCACACAGCAACAACAAAGACATTCACACTTGCCCCCTCAGCAAGGCCATTTCCCTGAATCTTCATACCGCAACAGTGTACATTCCTATTCATCAGCACAAATTGAAAAACCAGGGCTAGTTTCAGATTCTTGGAGAGTTAGGCAAGACGTGCCATCATCCAGTTACCATTCCGATAGAAATCAAAACTACTATAACAACGCATATGTTGGGGGGTCCATGCAGGGTGGTCCTTCTTGGGATAGAAATGATCATGCAACAAGGGGAAACTATGAAACATGGAGCCCAGATAATAATAGTCCAAGTAGAAATCCTAGGTATGTTGCTGGTAGGAGTTTCCCAGAGTCCAGAATGAATCAGCATGGAAGAAACCATAGGCCTGATTGGTCAAGGCAGCGTGGTTCTTCTGGACACTGGGACCCTGCTAGGCAGGGAAACAGAAAGTGGCATGACCAGAGACGATGA 3105 0.438 MDFPNDDFLELPIGNSAESLQRFLASQRDLFHSQIDQFQEIVVTQCKLTGVNPLSQEMAAGALSINIGKRPRDLLNPKAVNYMQSVFSIKDAISKKESREISALFGVTVTQVRDFFNGQRSRVRRFVLLSREKALKSNSLEEPHDGLINSDPMRPINPAPLNSIMPSNAENASCSTQEAALSDLDDLDKKFVDNIFSLMEKEESFSGQEKLMEWILTIQNFSVLLWFLTRGGVMILATWLSVAAVEEQTSVLLLILKVLCHLPLHKALPTHISAILQCVNRLRFYRTSDISNRARVLLSKWSKLLARDQAMKKPNGVKLSNDGLKERVFSQSLHFSLIIHSCFQEDILALSNDHSDNLRKLEPSQSLKLLPSSSDDSHKKLALGVSSSQSNGPRERRKVQLVEQPGQKSVTRSPQATRVAPVNQGRPMSADDIQKAKMRALFMQSKYAKNGSSKESKDAKIDGLHKRQTNQASIAACSAKVPVPPKIEDDKKTSLLPSSKITNKPEASYSKTRMDANEPVWEKCKRVQIPWKTPAEVKLRDTWSVGAGENSKEVDVQKNRNRREKETVYQTVQEIPSNPKEPWDLEMDYDDTLTLEIPIEQLPDVDGAELTVAPEVATHAVHGVATTSSTSNVADTAQPDLELLAVLLKNPDLVFALTSGQGGIQSEETVKVLDMIKRGGLNLGTNDTNHGNGNGISAKTTETVEVSLPSPTPSSDPRTSGWSTVPPKNPFSRQSLESARSYPAVATTNLISQVPATGTTVLRQQPAMALPSSNPFTSTVVSSYSLPQATNLPETERQPPLALSSMHVQQTPLSDIGLTMKNITSTNPSSVNLAGAYSPLAMQVNGTSNVKPVPNMSVEDGLSNSFPQSFRLASTTPTLSTTQQQQRHSHLPPQQGHFPESSYRNSVHSYSSAQIEKPGLVSDSWRVRQDVPSSSYHSDRNQNYYNNAYVGGSMQGGPSWDRNDHATRGNYETWSPDNNSPSRNPRYVAGRSFPESRMNQHGRNHRPDWSRQRGSSGHWDPARQGNRKWHDQRR 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241767g00014 1034 MobiDBLite consensus disorder prediction 496 510 - -
Stsc241767g00014 1034 SUPERFAMILY Homeodomain-like 68 129 IPR009057 -
Stsc241767g00014 1034 MobiDBLite consensus disorder prediction 379 395 - -
Stsc241767g00014 1034 MobiDBLite consensus disorder prediction 706 735 - -
Stsc241767g00014 1034 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 106 1016 - -
Stsc241767g00014 1034 MobiDBLite consensus disorder prediction 368 428 - -
Stsc241767g00014 1034 SMART HOX_1 68 130 IPR001356 GO:0003677
Stsc241767g00014 1034 MobiDBLite consensus disorder prediction 404 422 - -
Stsc241767g00014 1034 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Stsc241767g00014 1034 MobiDBLite consensus disorder prediction 998 1013 - -
Stsc241767g00014 1034 MobiDBLite consensus disorder prediction 956 1034 - -
Stsc241767g00014 1034 MobiDBLite consensus disorder prediction 550 571 - -
Stsc241767g00014 1034 MobiDBLite consensus disorder prediction 969 986 - -
Stsc241767g00014 1034 MobiDBLite consensus disorder prediction 483 513 - -
Stsc241767g00014 1034 MobiDBLite consensus disorder prediction 931 950 - -
Stsc241767g00014 1034 MobiDBLite consensus disorder prediction 553 569 - -
Stsc241767g00014 1034 MobiDBLite consensus disorder prediction 876 915 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241767g00014 Stsc-Chr241767 62485 70801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241767g00014 516 734 Homeobox Transcription Factor Family AT4G02560 48.636 1.39e-45 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241767g00014 - - adu:107492506 1729.15