Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241763g00010 ATGGCCTTTTCTCAAACCCTAGAACAAGCATCTCCCTCTCTGGTCTTCAAAGTCCACAGAAAGCAACCAGAGCTGGTAGCTCCTTCTAAGCCCACACCCCATGAAACCAAGCTTCTATCCGACATCGATTCGCAAGCCGGCCTTCGCGCCCAAATTCCGATCATACAGTTCTACCGGAGCGAGCCTTCAGTGGAAGGAAAAGACCCAGTTGAAATCATTAGAAATGCAATTGCAGAAGCACTTGTGTTCTATTACCCACTCGCCGGTAGGGTTAGGGAAGGGGCTGATGGAAAACTCATGGTGGATTGTAATGAAGAAGGAGTGATGTTCATTGAAGCTGATGCTGATGTTACACTTGATCAGTTTGGTGATGCTCTTAAACCTCCATTTCCATGCTTTGAAGAGCTCCTTTATGATGTTCCCGGTTCAGAAGGAGTTATTGACACTCCCATTCTTCTTATTCAGGTGACTCGTCTGAAATGCGGCGGATTCATCTTCGGCCTCCGCTTCAACCACGCCATGATCGACGGTGTGGGCGTGGTCACGTTCATGTACACGCTTTCCGCCTTCAGCCATGGCGCACAAGACCCTCCCTTCACCCCAATTTGGAGCAGGGAGCTCCTACACGCACGTGACCCCCCTCGCGTCACGTGCACCCACCCGGAGTACGACCAACTCACAGACCCAAACGATGTAACCACCCCCTCCACCATTAATCTCCAGCAACACTCCTTCTTCTTCGGAGATTCCGAGGTATCAACCCTCCGATCCCTCCTCCCGGAAAGCCTCTCCGACGCAACCACGTACCATATCCTAACCGCATTCGTATGGCAATGCCGAACCAAAGCGTTGGGTTTTAATCCAAACGACGACGTTAGAATGATGTGCATTACCGATGGGCGCGCCAAGTTTAACCCTCCCATTCCAATGAGTTACTACGGTAACTGCTTGGCGCTCCCGGCAGCTGTTACAACTGCCGGGGAGCTCTGCGAGGGCACTCTTGGATACGCGGTTGGGCTTATCCAAGAGGCAATCGCAAAGGTTGACGAAGAATATATGCATTCTGTGGCTGATTTTATGGTTACAAATGGGAGGCCTTTGTTTACTACGGTGAGGTCTTGCATTGTGTTGGATACTACTTATGCTGGATTTAGAGGTGTGGATTTTGGGTGGGGTAAGGCTTTGTATGGTGGGTTAGCGAAACCTGGTGCTGGTGCATTCCCTGCGGTGAATTTTCATGTTCCTAGCCAGAATGAAAAGGGAGAAGAAGGTATATTGGTTCTTACTTGTTTGCCTGCTCAAGCTTTGAAGGCTTTTGCCAAAGTGATGGATGAGGTCATGCTTGAGAGTAACAAAACAAAGTAA 1365 0.4974 MAFSQTLEQASPSLVFKVHRKQPELVAPSKPTPHETKLLSDIDSQAGLRAQIPIIQFYRSEPSVEGKDPVEIIRNAIAEALVFYYPLAGRVREGADGKLMVDCNEEGVMFIEADADVTLDQFGDALKPPFPCFEELLYDVPGSEGVIDTPILLIQVTRLKCGGFIFGLRFNHAMIDGVGVVTFMYTLSAFSHGAQDPPFTPIWSRELLHARDPPRVTCTHPEYDQLTDPNDVTTPSTINLQQHSFFFGDSEVSTLRSLLPESLSDATTYHILTAFVWQCRTKALGFNPNDDVRMMCITDGRAKFNPPIPMSYYGNCLALPAAVTTAGELCEGTLGYAVGLIQEAIAKVDEEYMHSVADFMVTNGRPLFTTVRSCIVLDTTYAGFRGVDFGWGKALYGGLAKPGAGAFPAVNFHVPSQNEKGEEGILVLTCLPAQALKAFAKVMDEVMLESNKTK 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241763g00010 454 Gene3D - 224 445 IPR023213 -
Stsc241763g00010 454 Pfam Transferase family 17 444 - -
Stsc241763g00010 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 24 439 - -
Stsc241763g00010 454 Gene3D - 14 223 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241763g00010 Stsc-Chr241763 86974 92264 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241763g00010 17 446 Monolignol Biosynthesis Gene Families AT5G48930 28.442 1.73e-54 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241763g00010 K19861 - gmx:100820325 630.172