Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241763g00001 ATGGCTGAAGGAAGTTCGCATCCATGCGATTTGAGTTCAAATTCTGCAATAGAGCATATTGACGAGCAATTGGAGTTTTTGTGTAATGTTGATGAAGAATGCGTCCCCAAGGTTGGGATGACTTTCCTAACCTGTCAAGAAGCCAATGATTTTTACAAGGAGTATGCTAAACGAGACGGATTTGTAAGTAAAATCAGAAATTCAAATAGGAATAAAGAGACCGGTAAAATCAAGAATCAGCTTATCACTTGTAACAGAGAGGGGACTTTGAATGAGATGAATGAATTGCAAAGCCCAATACGTATTAGATCAAGAGGACGTCCGAAGAAAAGGTAG 336 0.3899 MAEGSSHPCDLSSNSAIEHIDEQLEFLCNVDEECVPKVGMTFLTCQEANDFYKEYAKRDGFVSKIRNSNRNKETGKIKNQLITCNREGTLNEMNELQSPIRIRSRGRPKKR 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241763g00001 111 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 93 - -
Stsc241763g00001 111 Pfam FAR1 DNA-binding domain 50 98 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241763g00001 Stsc-Chr241763 24667 25547 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc241763g00001 FAR1 3.6e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241763g00001 - K17604 aip:107614666 78.9517