Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241760g00008 ATGGGGTGTTGTGTCTCAACCAGTAGTAAGAGTACCTGTAGCAGCCATAGCAATGGAGAGATGGCGAATCCGTCTTGCTTCGAAATTGGATGTTGTGTGCATAAGAAAGCAAGGAGAACTTTCTCAGATCATGTTATTTCACTACACCATTTGGCATCACTGCCTAGTAGGATTTTCACTAATGGAAAGAGCAGGGCTTCTTGCATATTTACGCAGCAGGGCCGCAAGGGAATCAATCAGGATGCAATGATTGTGTGGGAAGATTTTATGTCTGAAGATATGACCTTTTGTGGTGTCTTCGATGGCCACGGTCCCCATGGTCATCTCGTTGCGCGAAAAGTGAGGGATGCCTTGCCTTTGAAGCTTCTCTCGTTTCTGCATTCTTCTGAATCGAAGCGAAATGGATCAGGTAAAGCTTGCTTCAAGGGGAACATAAAACCTGAAAATAGAGACGCTCAGAAGGATTTATCCGCCGAGGATAAACTAAATTCAACATGGAGAGAGGCTTTCATGAAGGCATACAAGTCTATGGACAAAGAGCTCAGGTCGCATCCGAATTTGGACTGCTTTTGCAGCGGCAGCACGGCTGTCACAATAGTGAAGCAGGGCTCGAATTTGTTCATGGGATATATCGGGGATTCTCGAGCAGTGATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAATTCAGTTGACAGTCGATTTGAAGCCCGATTTGCCAAGAGAAGCAGAAAGAATTAAACGGTGCAAGGGAAGGGTGTTTGCTTTGCAAGATGAGCCTGAGGTGCCAAGGGTATGGTTGCCTTTCGATGATGCACCGGGATTAGCGATGGCTAGAGCATTCGGAGATTTCTGCTTGAAGGAGTATGGTGTGATTTCCATACCTGAATTTTCTCACCGGCTGCTTACTGATAAAGATCAATTTATTGTCCTTGCCTCAGATGGGGTCTGGGATGTTTTAAGCAATGAAGAAGTGGTTGAGATAGTATCTTCGGCACCAACACGGTCATCGGCCGCAAGGATTCTGGTAGATGCTGCAGCCCGGGAGTGGAAACTTAAGTATCCGACTTCAAAGATGGACGACTGCGCCGTGGTCTGCCTATTTTTGGACGGTAAAATGGACTCCGAATCCGATTATGACGAACAAGGCTTCTCTTCTGCAACCCTCCAGAGCAACCATTCTGGAAATCCGGTAGAGTCGTCGGACGACGGACAAAAATCCGAGCCGTCCTTGCAGAGGAACTTCACGGTTAGATCCTCAGAGGAAAATGATACTAATAATGTTGTACAATCCATTGATGTTGAAGATGGAACATCATCAGCTGATGATCAGAATTGGTCAGGTTTGGAAGGTGTTACTCGTGTGAACTCATTGGTCCAACTACCTAGATTCTCAGAAGAAAGGACAAACAAATCATGA 1422 0.462 MGCCVSTSSKSTCSSHSNGEMANPSCFEIGCCVHKKARRTFSDHVISLHHLASLPSRIFTNGKSRASCIFTQQGRKGINQDAMIVWEDFMSEDMTFCGVFDGHGPHGHLVARKVRDALPLKLLSFLHSSESKRNGSGKACFKGNIKPENRDAQKDLSAEDKLNSTWREAFMKAYKSMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAVMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDKDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGFSSATLQSNHSGNPVESSDDGQKSEPSLQRNFTVRSSEENDTNNVVQSIDVEDGTSSADDQNWSGLEGVTRVNSLVQLPRFSEERTNKS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241760g00008 473 SMART PP2C_4 55 368 IPR001932 -
Stsc241760g00008 473 MobiDBLite consensus disorder prediction 381 449 - -
Stsc241760g00008 473 FunFam probable protein phosphatase 2C 52 57 373 - -
Stsc241760g00008 473 CDD PP2Cc 72 370 IPR001932 -
Stsc241760g00008 473 Pfam Protein phosphatase 2C 136 347 IPR001932 -
Stsc241760g00008 473 SUPERFAMILY PP2C-like 58 372 IPR036457 -
Stsc241760g00008 473 Gene3D - 58 378 IPR036457 -
Stsc241760g00008 473 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Stsc241760g00008 473 MobiDBLite consensus disorder prediction 380 449 - -
Stsc241760g00008 473 PANTHER PROTEIN PHOSPHATASE 66 368 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241760g00008 Stsc-Chr241760 51597 55223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241760g00008 1 468 PP2C-type Phosphatase Gene Family AT1G03590 69.053 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241760g00008 - - adu:107477895 903.664