Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241758g00001 ATGGATTTTAATATTGACTTAAACTCAATTCCTTCTTGCTCAGAAATTGAAGAAGAATTTAATCATGTGCCAAACTCGCCCAACGCTGATGTTATTAGTCACGAAATATCTGACAATTTGGACGTACACAACGACCATAATGAGGTTACCAACCCATCTTTTGATGCATTGGAGTCATATCCATGTGAGGGGATGTGTTTTGGCACACTTGAGGAGGCACGCAAGTTTTATTTTCGATTTGCATCAAATTCTGGTTTTGTCGCCAAAACAAGGACCACCAATTGGCGGACTATAGATGGCCAGAGGGTAATTGTATCTCAATTATTTCACTGCAACAAAGATGGCAATCGTGGATCTCGGGTGAAAGCACCAAAGAGGAGGAAAACTCTATCATCTGCCGATTGCAAAGCCCGTTGTTATGTCGTGTTGGATAAGGGCACCGGTCAATGGATGATAAAAAAAATTAGAATTATCACATACACACCCAATTAA 492 0.4024 MDFNIDLNSIPSCSEIEEEFNHVPNSPNADVISHEISDNLDVHNDHNEVTNPSFDALESYPCEGMCFGTLEEARKFYFRFASNSGFVAKTRTTNWRTIDGQRVIVSQLFHCNKDGNRGSRVKAPKRRKTLSSADCKARCYVVLDKGTGQWMIKKIRIITYTPN 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241758g00001 163 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 155 - -
Stsc241758g00001 163 Pfam FAR1 DNA-binding domain 75 155 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241758g00001 Stsc-Chr241758 1562 3107 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc241758g00001 FAR1 1.2e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241758g00001 - - ahf:112775207 162.54