Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241756g00001 GATAAAGTGTACAAGGATATAGTAGGGAGTGCATACTATGTGGCTCCGGAGGTGCTGAAACGCAACTATGGAAAGGAGATAGATGTATGGAGTGCTGGAGTCATTCTATACATACTCTTAAGTGGAGTGCCCCCATTTTGGGGTGAAACCGAGAAGCAGATCTTTGATGCTATCTTGGAAGGTAAGTTAGATCTGGAAAGCGCACCATGGCCTTCTATTTCAGCTGCTGCAAAAGATTTGATCAGGAAAATGTTGGCTTATGAACCTAAGAAACGCATCACAGCTTCTGCTGCCCTAGAACACCCTTGGATGAAGGAAGGGGGGGAAGCATCTGACAAGCCTATAGACAATGCGGTTTTAAGTAGGATGAAACAATTCAGAGCAATGAACAAGATGAAAAAACTTGCTTTAAAGGTGATAGCTCAAAACCTTTCAGAGGAAGAAATCAAAGGCCTGAAACAAATGTTCAACAATATGGATACAGATCGCAGCGGCACAATCACATTTGAAGAACTGAAATCTGGTTTGTCCAGATTGGGATCCAAGCTTTCTGAAACTGAAATAAGGCAGCTAATGGATGCGGCTGATGTTGATAAGAGTGGAACCATTGACTATTATGAATTCATTACTGCCACCATGCATCGGCATAAACTTGAGAAGGAAGAGAATTTGTATAAGGCTTTTCAATACTTCGACAAGGATAACAGCGGTTACATAACAAGAGATGAGCTTAGACATGCTTTGACTGAATATCAAATGGGAGATGAAGCAACTATTGATGAAGTCATTAATGACGTTGACACTGACAGGGATGGGAGGATCAACTACGAGGAGTTCGTGTCTATGATGAGGAAGGGGACATTGGATAATGATGGGATTGTCGGCAAAGAAAGATCACGATAA 903 0.4186 DKVYKDIVGSAYYVAPEVLKRNYGKEIDVWSAGVILYILLSGVPPFWGETEKQIFDAILEGKLDLESAPWPSISAAAKDLIRKMLAYEPKKRITASAALEHPWMKEGGEASDKPIDNAVLSRMKQFRAMNKMKKLALKVIAQNLSEEEIKGLKQMFNNMDTDRSGTITFEELKSGLSRLGSKLSETEIRQLMDAADVDKSGTIDYYEFITATMHRHKLEKEENLYKAFQYFDKDNSGYITRDELRHALTEYQMGDEATIDEVINDVDTDRDGRINYEEFVSMMRKGTLDNDGIVGKERSR 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241756g00001 300 ProSiteProfiles EF-hand calcium-binding domain profile. 147 182 IPR002048 GO:0005509
Stsc241756g00001 300 ProSitePatterns EF-hand calcium-binding domain. 232 244 IPR018247 -
Stsc241756g00001 300 Pfam EF-hand domain pair 152 212 IPR002048 GO:0005509
Stsc241756g00001 300 Pfam EF-hand domain pair 221 284 IPR002048 GO:0005509
Stsc241756g00001 300 Pfam Protein kinase domain 4 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241756g00001 300 SMART serkin_6 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241756g00001 300 SUPERFAMILY EF-hand 143 284 IPR011992 -
Stsc241756g00001 300 ProSiteProfiles EF-hand calcium-binding domain profile. 255 289 IPR002048 GO:0005509
Stsc241756g00001 300 ProSitePatterns EF-hand calcium-binding domain. 196 208 IPR018247 -
Stsc241756g00001 300 FunFam Calcium-dependent protein kinase SK5 14 109 - -
Stsc241756g00001 300 Gene3D Transferase(Phosphotransferase) domain 1 1 108 - -
Stsc241756g00001 300 ProSitePatterns EF-hand calcium-binding domain. 160 172 IPR018247 -
Stsc241756g00001 300 SMART efh_1 187 215 IPR002048 GO:0005509
Stsc241756g00001 300 SMART efh_1 151 179 IPR002048 GO:0005509
Stsc241756g00001 300 SMART efh_1 258 286 IPR002048 GO:0005509
Stsc241756g00001 300 SMART efh_1 223 251 IPR002048 GO:0005509
Stsc241756g00001 300 Gene3D - 111 289 - -
Stsc241756g00001 300 ProSiteProfiles Protein kinase domain profile. 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241756g00001 300 FunFam Calcium-dependent protein kinase 1 112 287 - -
Stsc241756g00001 300 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 279 - -
Stsc241756g00001 300 ProSiteProfiles EF-hand calcium-binding domain profile. 219 254 IPR002048 GO:0005509
Stsc241756g00001 300 ProSiteProfiles EF-hand calcium-binding domain profile. 183 218 IPR002048 GO:0005509
Stsc241756g00001 300 SUPERFAMILY Protein kinase-like (PK-like) 4 131 IPR011009 -
Stsc241756g00001 300 ProSitePatterns EF-hand calcium-binding domain. 267 279 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241756g00001 Stsc-Chr241756 534 2354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241756g00001 2 291 EF-hand Containing Proteins AT1G76040 81.379 3.01e-179 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Stsc241756g00001 Pkinase 6.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241756g00001 K13412 - gmx:100816157 508.834