Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241752g00018 ATGGGACTTGTTCGTGAATCAATTCAGGAGAAATTACAACATCAACCACATTCAATGACCCTCTCTGCCTTATGTTTCATAATCATAACCATTTTGTGTATTCTTAAGTTCACAAGAAGAAACAAGTTCAATAACCTTCCACCATCTCCACCAAAGCTACCATTAATTGGAAACCTTCATCAACTTGGAACACTTCCACACCAATCCTTCAAATCACTTTCAAACAAATATGGACCTCTTTTTTTGCTTCAATTAGGGCAAACTCAAGCCCTAGTTGTCTCTTCAGCAGAACTTGTTGAAGAAATAGCAAAATCACATGATGTTGCTTTCGCCAATAGATTAAACACCAAAGCTGTAAAGACTTTCTTCTATCAAGGGATGGATGTTGCTTTTGCAACCTACGGAGAAGAGTGGAGACAGAAAAGAAAATTGTGCCTTCTCGAACTTCTAAACTCAAATAGGGTAAGGTCATTTCAGCCAATTAGAGAAGATGAAGCATCAACGATGGTCAACACCATATGTGAAGCTTGTGCAAAAGGGTCCATTGTGAATCTATCTAAGATATTCATTACAACCACAAACAACATAGCTTCAAGGTGCATTTTTGGGAGAAGATTTGAAGCAAGTGATAGTGGTGGTGATGATGATGGTAGAAAAACCATTGGAGAAGTAGTGAGGAAGATGACGTCACAATTAACAACACTTGGGATTGGAGACTTATTCCCTTCATTGGATTGGGTTGATATTGTTACCGGTTTCAACTCAAGATTGAAGGCTACCTTTACTGAACTAGATTCAGTTTTGGAAGAGGTTATTGAAGAGCACAAGAAAAAGAAAAGGAACAATAATATTAATGATAAAGATTTTGTTGATATATTTCTTCAGCTTCAAGAGAAGGACATGCTTGAGTTTCAGCTCACCGGAGATAGCATGAAAGCAATCCTCATGGACATGTTTGTGGGAGGAAGTGACAGTGTTTCAACTGCTCTTGAATGGACTTTTGCCGAGCTTGTAAAGAAACCAAAGTGCATGAAGAAAGCTCAAGAAGAGGTGAGAAGAATTGTGGATGGAAACTCCATGATAGAGGAAAATCATCTAAACCAAATGAACTACATGAAGTGTGTAATCAAAGAAACCCTAAGATTACATCCACCAGCTCCACTTTTGACCCGTAGAAAAACATCAACTAATGTGAAAATCAATGGCTACAACATTCCCAACGAAATAACAGTGTATGTGAATTCATATGCAATTCATAGGGACCCTAAATTATGGGACAATGCTGAAGAGTTTATTCCTGAAAGATTTGAAGGTGAGCAACAAGTTGATTATAATAAGGTAATAGATTTTCAATTAATCCCATTTGGTATTGGAAGAAGAGGGTGTCCTGGAGCTTCATTTGGGATTGCAATTGTTGAATATTTGATGGCTAATCTTTTATATTGGTTTGATTGGAAGGTGCCTAATAATATTAGTAATGGAAATGATGATGATGATGTAGAAATGGATATGAGTGAGATGAGTGGAATGACAGTCACCAAGAAAGTGCCACTTTATCTTAAGCCAACACTTCACTCATTTGTTTCTAATAGGTGTTGA 1599 0.3721 MGLVRESIQEKLQHQPHSMTLSALCFIIITILCILKFTRRNKFNNLPPSPPKLPLIGNLHQLGTLPHQSFKSLSNKYGPLFLLQLGQTQALVVSSAELVEEIAKSHDVAFANRLNTKAVKTFFYQGMDVAFATYGEEWRQKRKLCLLELLNSNRVRSFQPIREDEASTMVNTICEACAKGSIVNLSKIFITTTNNIASRCIFGRRFEASDSGGDDDGRKTIGEVVRKMTSQLTTLGIGDLFPSLDWVDIVTGFNSRLKATFTELDSVLEEVIEEHKKKKRNNNINDKDFVDIFLQLQEKDMLEFQLTGDSMKAILMDMFVGGSDSVSTALEWTFAELVKKPKCMKKAQEEVRRIVDGNSMIEENHLNQMNYMKCVIKETLRLHPPAPLLTRRKTSTNVKINGYNIPNEITVYVNSYAIHRDPKLWDNAEEFIPERFEGEQQVDYNKVIDFQLIPFGIGRRGCPGASFGIAIVEYLMANLLYWFDWKVPNNISNGNDDDDVEMDMSEMSGMTVTKKVPLYLKPTLHSFVSNRC 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241752g00018 532 CDD CYP71-like 76 518 - -
Stsc241752g00018 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Stsc241752g00018 532 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00018 532 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00018 532 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00018 532 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00018 532 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00018 532 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00018 532 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00018 532 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00018 532 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00018 532 Gene3D Cytochrome P450 34 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00018 532 Pfam Cytochrome P450 47 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00018 532 PANTHER CYTOCHROME P450 71B11-RELATED 31 523 - -
Stsc241752g00018 532 FunFam Cytochrome P450 83B1 33 521 - -
Stsc241752g00018 532 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00018 532 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00018 532 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00018 532 SUPERFAMILY Cytochrome P450 47 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241752g00018 Stsc-Chr241752 98739 101809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241752g00018 39 519 Cytochrome P450 AT3G48310 39.627 4.48e-129 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241752g00018 K20617 - qsu:111998457 541.576