Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241752g00017 ATGGCAGTTGTTCATGAATCAATTCAGGAGAAATTGCAACATGAACCGCATTCAACAACCCTCTCTGCCTTATGTTTCATAATCATAACCATTTTGTGTATTCTTAAATTGACAAGAAGAAACAAGTCCAATAACCTTCCACCATCTCCACCAAAGCTACCATTGATTGGAAACCTTCATCAATTAGGAACACTTCCACACCAATCCTTAAAAGCACTTTCAAACAAATATGGACCTCTTTTTTTGCTTCAGTTAGGGCAAACTCAAGCCCTAGTTGTCTCTTCAGCAGAACTTGTTGAAGAAATAGCAAAATCACATGATGTTGCTTTCTCCAATAGAATAAACACTAAAGCTATAAAGATTTTCTTCTATCAATGCAAGGAGATTGGTTTTGCACCCTATGGAGAAGACTGGAGAAAGAAAAGAAAGTTGTGTCTTCTTGAACTTCTAAACACAAATAGGGTAAAGTCATTTCAGCCAATAAGAGAAGATGAAGCATCAATGATGGTCAGCACCATATGTGAAGCTTGTGCAAAAGGGTCCATTGTGTACCTATCTAAGATGATCATTAAAACCACAAACAACATAGCTTCAAGGTGCATTTTTGGGAGAAGTTTTGAAACAAGTGATGGTAGTGATGATGATGGTAGAAAAACCATTGGAGAAGTAGTGAGGAAGATGACATCACAATCAACAACACTTGGGGTTGGAGACTTGTTCCCTTCATTGGATTGGGTTGATGTTCTTACCGGTTTCAACTCAAGATTGAAGGCTACTTATGTTGAATTAGATTCCATTTTGGAAGAGGTTATTGAAGAGCACAAGAGAAAGAAAAGGAACAAGAATATGAATGATAAAGATTTTGTTGATATATTTCTTGAACTTCAAGAGAGGGACATGCTTGAGTTTCAGCTCACCGGAGATACCATGAAAGGAATCCTCATGGACATGTTTGTGGGAGGAAGTGACAGTGTTTCAACAGCAATTGAATGGGCTTTTGCTGAGCTTGCAAAGAACCCAAAGTACATGAAGAAAGCTCAAGAAGAGGTGAGAAGAATTGTGGATGGAAAATTCAAAATAGAAGAAAATCATCTAAACCAAATGAACTACATGAAGTGTGTAATCAAAGAAACCCTAAGATTACATCCACCAGTTCCCCTTTTGATGCGTATAAAAACATCAACTAATATGAAAATCAATGGCTACAACATTCCCAACAAAACAACAATGTATGTGAATTCATATGCAATTCATAGGGACCCTAAATTATGGGACAATGCTGAAGAGTTTATTCCTGAAAGATTTGAAGATAATAACAATAATCAACAAGTTGATTATAAAGCAATAGATTTTCAGTTAATCCCATTTGGTTTTGGAAGAAGAGGGTGTCCTGGAATTTCATTTGGGATTGCATCTGTTGAATATTTGATGGCTAATCTTTTATATTGGTTTGATTGGAAGGTGCCTAATAATAATAGTAATGGAAATGATGATGATGATGATGTAGAAATGGATATGAGTGAGATGAGTGGAATGACAGTCACCAAGAAAGAACCACTTTATCTTAAGCCAACACTTTACTCATTTGTTTCTAAGTGTTGA 1602 0.3614 MAVVHESIQEKLQHEPHSTTLSALCFIIITILCILKLTRRNKSNNLPPSPPKLPLIGNLHQLGTLPHQSLKALSNKYGPLFLLQLGQTQALVVSSAELVEEIAKSHDVAFSNRINTKAIKIFFYQCKEIGFAPYGEDWRKKRKLCLLELLNTNRVKSFQPIREDEASMMVSTICEACAKGSIVYLSKMIIKTTNNIASRCIFGRSFETSDGSDDDGRKTIGEVVRKMTSQSTTLGVGDLFPSLDWVDVLTGFNSRLKATYVELDSILEEVIEEHKRKKRNKNMNDKDFVDIFLELQERDMLEFQLTGDTMKGILMDMFVGGSDSVSTAIEWAFAELAKNPKYMKKAQEEVRRIVDGKFKIEENHLNQMNYMKCVIKETLRLHPPVPLLMRIKTSTNMKINGYNIPNKTTMYVNSYAIHRDPKLWDNAEEFIPERFEDNNNNQQVDYKAIDFQLIPFGFGRRGCPGISFGIASVEYLMANLLYWFDWKVPNNNSNGNDDDDDVEMDMSEMSGMTVTKKEPLYLKPTLYSFVSKC 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241752g00017 533 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00017 533 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00017 533 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00017 533 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00017 533 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00017 533 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00017 533 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00017 533 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00017 533 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00017 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Stsc241752g00017 533 PANTHER CYTOCHROME P450 71B11-RELATED 31 525 - -
Stsc241752g00017 533 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00017 533 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00017 533 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00017 533 Pfam Cytochrome P450 47 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00017 533 FunFam Cytochrome P450 83B1 33 523 - -
Stsc241752g00017 533 CDD CYP71-like 76 520 - -
Stsc241752g00017 533 Gene3D Cytochrome P450 34 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00017 533 SUPERFAMILY Cytochrome P450 47 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241752g00017 Stsc-Chr241752 83909 88258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241752g00017 18 527 Cytochrome P450 AT1G13110 39.652 4.51e-130 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241752g00017 K20617 - qsa:O6P43_022640 536.569