Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241752g00016 ATGGCACTTGTTCTATCAGTTCTAGAGAAATTGCAACTTAAACCGCCACATTCAACCCTATCTACCTCATGTTTCATAATCATAACCATTTTATGTATTATTCTTAAGTTCACAAGAAGAAACAAGTTGAACAACCTTCCACCATCACCACCAAAGCTACCAATAATTGGAAACCTTCATCAACTTGGAACACTTCCACACCAATCCTTAAAATCACTTTCAAACAAATATGGCCCTCTTTTGTTACTTCAGTTAGGGCAAAATCAAGCCCTAGTTGTCTCTTCAGCAGAACTTGTTGAAGAAATAGCAAAATCACATGATGTTGCTTTCTCCAATAGAGCAAACACTAAAGCTGCAAAGGTGTTCTTCTATCAATGTAAGGAGATTGGTTTTGCACCATATGGAGAGGAATGGAGACAGAAAAGGAAATTTTGTGCTCTTGAGCTTTTAAGCACAAATAGAGTAAAGTCCTTTCAACCCATTAGAGAAAATGAAGTATCAATGTTAATTAACTCCATACATGAAGCTTGTGCAAAAGGGTCATCAGTGAACCTATCTAAGATGATTGTTGCAACCTCAAACAACATAGCTTGTAGGTGCATTTTTGGGCTAAGGTTTGAAACAATAAGTGATGATGATGATGATGGTAGAAAAAGCCTTGGTGAGGTTGCAAGGAAAATGCTGACACAATTATCAAAACTTGGGGTTGGAGATTTGTTCCCTTCATTGGATTGGGTTGATGTTCTTACAGGTTTCATGTCAAGATTAAAGGTTACTTTTGCTGAATTAGATGCTTTCTTAGAAGAGGTTATTGAAGAGCATAAGAGAAAGAAGAGAAACAACAATGATAATAATAATAGTAAAGATTTTGTTGATATACTTCTTGAACTTCAAGAGAAGGACATGCTTGAGTTTGAGCTCACAAGAGATACCATGAAAGCACTCCTCTTGGATATGTTTGTTGCTGGAAGTGACACTGTTTCAGCAACTACTGAATGGGCCTTTTCAGAGCTTGTTAACCATCCAAAGACCATGAAGAAAGTCCAAGAAGAGATAAGAAGAATTGTGGGTGAAAAATCCATGGTAGAAGAAAATGACCTAAATCAAATGAACAACATGAAGTGTGTAATCAAAGAAACCCTAAGATTACACCCACCTGGTCCACTTTTGATTCCAAGAGAAACAGCAAATAGTGTGAAGATAAAAGGGTACCATATTCCTGAAAATGTAACCGTTTATATAAATGAATATGCAATTCATAGAGACCCTAAATTATGGGAAAATGCTGAAGAATTTATACCTGAAAGATTTGAAGGTAATAATAATAATCAACAAATTGATTATAAGGTAATAGATTTTAAATATATTCCATTTGGTATTGGGAGAAGGGGTTGTCCTGGAGTTTCATTTGGGATTACTTCTCTTGAATATTTGATGGCAAATCTTCTCTATTGGTTTGATTGGAAGGTTCCAAATAATAATAATAATGATAGTGGTGCATTGATGATAGATATGAATGAGAGGAGTGGGTTGACTATCTCCAAGAAAAAACCACTTTATTTGGAGCCAATGCCTTACTTCTCTAAGGAGTGA 1593 0.3559 MALVLSVLEKLQLKPPHSTLSTSCFIIITILCIILKFTRRNKLNNLPPSPPKLPIIGNLHQLGTLPHQSLKSLSNKYGPLLLLQLGQNQALVVSSAELVEEIAKSHDVAFSNRANTKAAKVFFYQCKEIGFAPYGEEWRQKRKFCALELLSTNRVKSFQPIRENEVSMLINSIHEACAKGSSVNLSKMIVATSNNIACRCIFGLRFETISDDDDDGRKSLGEVARKMLTQLSKLGVGDLFPSLDWVDVLTGFMSRLKVTFAELDAFLEEVIEEHKRKKRNNNDNNNSKDFVDILLELQEKDMLEFELTRDTMKALLLDMFVAGSDTVSATTEWAFSELVNHPKTMKKVQEEIRRIVGEKSMVEENDLNQMNNMKCVIKETLRLHPPGPLLIPRETANSVKIKGYHIPENVTVYINEYAIHRDPKLWENAEEFIPERFEGNNNNQQIDYKVIDFKYIPFGIGRRGCPGVSFGITSLEYLMANLLYWFDWKVPNNNNNDSGALMIDMNERSGLTISKKKPLYLEPMPYFSKE 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241752g00016 530 CDD CYP71-like 92 519 - -
Stsc241752g00016 530 Gene3D Cytochrome P450 33 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00016 530 PANTHER CYTOCHROME P450 71B11-RELATED 31 524 - -
Stsc241752g00016 530 Coils Coil 345 365 - -
Stsc241752g00016 530 SUPERFAMILY Cytochrome P450 47 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00016 530 Pfam Cytochrome P450 47 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00016 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Stsc241752g00016 530 FunFam Cytochrome P450 83B1 33 522 - -
Stsc241752g00016 530 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00016 530 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00016 530 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00016 530 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00016 530 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00016 530 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00016 530 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00016 530 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00016 530 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00016 530 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00016 530 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00016 530 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241752g00016 Stsc-Chr241752 74324 77393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241752g00016 23 527 Cytochrome P450 AT3G26300 40.945 1.37e-132 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241752g00016 K20617 - aip:107632412 567.385