Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241752g00015 ATGTTGCTTCACCTTGGCCACCTTCAAGTTTTGGTGGTTTCCTCCGCGGAATTGGCAAAAGAAGTCATGCAAACAAACGATGTGGTTTTCGCTAGCCGGCCGCACCTCACCGCCGCGAGGGCCTTGCTCTATGGTTGTAAGGATGTCGCGTTCGAGTCCTATGGCGAAGCATGGAGACAGAAAAGGAAACTTTGTGTTCTTGAGTTGCTTAGTGCTAAAAGGGTTCAATTGCTCCAATTTATAAGAGAAGAGGAGGTTGAATTATTAGTTAAGAAATTACATGAATCTTGCATGAATATTAATAATAGTAGTTGTAGTAATTCTACTAATTATGTGAACCTTAGTGAGATGATAATTGCAACAACAAACAACATTGTAAGTAGGTGTTTATTTGGAAGGAAGTACTATAATCTAGAAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATTGTAGGTTTGGTGAGCTTGTGAGGAAGGTAATGAGTCAACTATTGGATTTAGGTATTGGAGATATTTTTCCTTTGATGGGTTGGGTTGATGTTCTAATAAGTGGAAGAGTTAAGAGGTATAGGGAAACTTTTGAAGTGTTGGATGCTTTCTTTGATCATGTAATTGAGGAGCATAAGATTGCAAGCAAAGAGGAGGATAATAATAATAAGAAGAAAGACTTTGTGGACATTCTTCTTCAACATCAAAAGGCTACTATGCTTGACTTTGAGCTTGGTGATGATGATCTTAAGGCACTCATATTGGACATGTTTTTGGGAGGAAGTGACACAACTTCAACAACACTAGAATGGGCTATGACAGAGCTTATGAGAAATCCAATCAAAATGAAAAAGGCCCAAGATGAGGTAAGAAGCGTTGTTGGCATCAACAAATCAAAATTAGAAGAAAATGATATTAATAAAATGAATTACTTAAAATGTGTCATCAAAGAAACCCTAAGGTTACATCCAGCTGCTCCTCTTTTGACTCCAAGAGAAACAACATCTAAGACTAAACTCCAAGCCTATGATATTCCCCAAAAAACAATGGTTTATGTTAATGTATGGGCAATTCAAAGAGATCCTCAACTTTGGGAAAATCCTGAAGAGTTCTTACCTGAAAGATTTGAAGACAATGAGGTTAATTTCAATGGCAAATACTTTCAATTTATACCATTTGGTTCTGGAAGAAGAAAATGCCCTGGAATGACATTTGGTCTTACGTCGATTGAGTATACGCTTTCTAATCTTTTATATTGGTTTGATTGGAAGCTACCTACTCAAAGTGATGGTGTACCTGGTCATGCCCTAGATATGTCTGAGATCTTTGGCCTCACTGTCAACAAGAAAGTACCGCTTTATCTTCGACCAATATCATATTGCAACGGCGACTACTCAAATGAAAATGTTTGTGTCTGA 1419 0.365 MLLHLGHLQVLVVSSAELAKEVMQTNDVVFASRPHLTAARALLYGCKDVAFESYGEAWRQKRKLCVLELLSAKRVQLLQFIREEEVELLVKKLHESCMNINNSSCSNSTNYVNLSEMIIATTNNIVSRCLFGRKYYNLENNNNNNNNNNNNNNNCRFGELVRKVMSQLLDLGIGDIFPLMGWVDVLISGRVKRYRETFEVLDAFFDHVIEEHKIASKEEDNNNKKKDFVDILLQHQKATMLDFELGDDDLKALILDMFLGGSDTTSTTLEWAMTELMRNPIKMKKAQDEVRSVVGINKSKLEENDINKMNYLKCVIKETLRLHPAAPLLTPRETTSKTKLQAYDIPQKTMVYVNVWAIQRDPQLWENPEEFLPERFEDNEVNFNGKYFQFIPFGSGRRKCPGMTFGLTSIEYTLSNLLYWFDWKLPTQSDGVPGHALDMSEIFGLTVNKKVPLYLRPISYCNGDYSNENVCV 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241752g00015 472 PRINTS E-class P450 group I signature 249 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00015 472 PRINTS E-class P450 group I signature 121 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00015 472 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00015 472 PRINTS E-class P450 group I signature 400 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00015 472 PRINTS E-class P450 group I signature 269 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00015 472 PRINTS E-class P450 group I signature 390 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00015 472 PRINTS E-class P450 group I signature 313 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00015 472 PRINTS E-class P450 group I signature 354 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00015 472 SUPERFAMILY Cytochrome P450 2 457 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00015 472 PANTHER CYTOCHROME P450 71B11-RELATED 1 458 - -
Stsc241752g00015 472 Pfam Cytochrome P450 3 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00015 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 393 402 IPR017972 GO:0005506|GO:0016705
Stsc241752g00015 472 FunFam Cytochrome P450 83B1 1 456 - -
Stsc241752g00015 472 CDD CYP71-like 1 453 - -
Stsc241752g00015 472 PRINTS P450 superfamily signature 260 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00015 472 PRINTS P450 superfamily signature 391 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00015 472 PRINTS P450 superfamily signature 400 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00015 472 PRINTS P450 superfamily signature 314 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00015 472 Gene3D Cytochrome P450 1 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241752g00015 Stsc-Chr241752 69411 71525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241752g00015 1 457 Cytochrome P450 AT3G26210 42.702 1.77e-122 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241752g00015 K20617 - cave:132175480 509.99