Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241752g00008 ATGCTTGGATTGTATGCAAACGATATTCTTTGTCGCGTCGCGTTCGGGAGAGATTTTTCGGTAGATGGAGAGTACCAAAAACATGGATTCCAAAAGATGCTTGATGAGTACCAAGAACTACTTGGAGGGTTCAGTGTTGGTGACTTCTTTCCTTCATTGGAGTTCATCCACAGCTTAACCGGCGCGAAATCGAGGCTTAAAGAAACTTCTAGAAGATTCGATCAGCTATTTGATCAGATATTGGATGAACATAAGGGATGCAATGATAATAATAAGATGGATGAAGAAAAGGATCTTGTTGATGTTTTGCTTGAAGTGCAGAAGAATGGCTCACATGAAATGCCTCTCACCACTGATAATATCAAAGCAATTATATTGGACATGTTTGCTGCAGGAACTGATACAACCTTCATTACCCTAGATTGGGGAATGACAGAGCTTCTAATGAATCCACAAGTTATGAGAATGGCACAAAAGGAAATTAGAAACATCATGGGAGAAAGAAGAGTTGTCCTAGAGAGTGATCTTCACCAATTCCACTACATGAAAGCAATTATCAAAGAAGTGTTCCGGCTACACCCTCCGGTGCCGGTTTTAGTCCCGAGAGAATCCATGGAAGACATAGTCCTAGAAGGATACGAAATCCCCGCGAGGACAAGATTCTTTGTCAATGCTTGGGCTATAGGAAGGGATCCTGAGAGTTGGGAAGATCCTAATGAGTTCAAACCGGAGAGGTTCTTAGGAAGCGATGTTGATTATAAAGGGAATGATTTCGAGTTGATTCCGTTTGGTGCTGGAAGAAGAGGGTGTCCTGCGATTGCGTTTGCGACCGCAGTTATTGAGCTTGCTCTGGCTCAGTTGCTACATAGTTTTGATTGGGAGCTTCCTCATGGTGTTAAAGTTGAAGATTTGGACCTCAGTGAAGTTTTTGGAATCTCCATGCATAGAAGAGAAAATCTTCATGTTGTTGCTAAGCCATATTTTCCATAA 990 0.4192 MLGLYANDILCRVAFGRDFSVDGEYQKHGFQKMLDEYQELLGGFSVGDFFPSLEFIHSLTGAKSRLKETSRRFDQLFDQILDEHKGCNDNNKMDEEKDLVDVLLEVQKNGSHEMPLTTDNIKAIILDMFAAGTDTTFITLDWGMTELLMNPQVMRMAQKEIRNIMGERRVVLESDLHQFHYMKAIIKEVFRLHPPVPVLVPRESMEDIVLEGYEIPARTRFFVNAWAIGRDPESWEDPNEFKPERFLGSDVDYKGNDFELIPFGAGRRGCPAIAFATAVIELALAQLLHSFDWELPHGVKVEDLDLSEVFGISMHRRENLHVVAKPYFP 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241752g00008 329 PRINTS E-class P450 group I signature 5 23 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00008 329 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00008 329 PRINTS E-class P450 group I signature 120 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00008 329 PRINTS E-class P450 group I signature 140 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00008 329 PRINTS E-class P450 group I signature 224 248 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00008 329 PRINTS E-class P450 group I signature 270 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00008 329 PRINTS E-class P450 group I signature 260 270 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00008 329 PANTHER CYTOCHROME P450 71B11-RELATED 2 325 - -
Stsc241752g00008 329 SUPERFAMILY Cytochrome P450 3 326 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00008 329 Gene3D Cytochrome P450 1 327 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00008 329 Pfam Cytochrome P450 2 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00008 329 CDD CYP71-like 1 320 - -
Stsc241752g00008 329 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 263 272 IPR017972 GO:0005506|GO:0016705
Stsc241752g00008 329 PRINTS P450 superfamily signature 184 195 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00008 329 PRINTS P450 superfamily signature 131 148 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00008 329 PRINTS P450 superfamily signature 261 270 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241752g00008 329 FunFam Cytochrome P450 71A1 isoform A 60 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241752g00008 Stsc-Chr241752 27629 29406 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241752g00008 9 328 Cytochrome P450 AT3G26330 41.796 1.98e-93 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241752g00008 - - qsa:O6P43_022628 528.48