Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241752g00006 ATGGGTTCGCTCGAAGCACCAACCACTACGGAAAACGGTTCCACCGCCAGTCCCGCCGGCAACGGCAAATCTCTCGCCACAGACGGCGCTGCGCGCGCTCCTCCGCCGGAGATGACGCCAGAAAAGGCGCCGGATTCGGACTCGTCGAAGCGCCGGAGATCGTCGGTTCTTCCCCTGGAGGTCGGAACGAGGGTTATGTGCCGGTGGAGGGACGGCAAATACCACCCTGTGAAGGTCATCGAACGCCGCAAGGTTTCTTCCACCGACCCCAACGATTACGAGTATTACGTTCATTACACAGAGTTTAATAGAAGGCTTGATGAGTGGGTGAAGCTCGAACAGCTTGATCTTGAGTCAGTAGAGGCTGTTGTTGACGAGAAAGTGGAGGAGAAGGGGGCAACAGGCTTGAAGATGACACGCCACCAGAAGAGGAAGATTGATGAGACACATGTAGAGGGCCACGAGGAGCTTGATGCTGCCAGTTTGCGAGAACATGAGGAATTTACCAAAGTGAAAAATATAGCTACTATTGAACTTGGAAGATATGAGATTGAGACATGGTACTTCTCCCCCTTCCCACCAGAATACAATGACTGTTTGAAGCTGTACTTCTGTGAGTTTTGCCTCAATTTCATGAAACGAAAAGAACAGCTTCAGAGGCATATGAGAAAATGTGATCTTAAGCATCCCCCTGGTGATGAAATATACAGAAGTGGTACCCTGTCAATGTTTGAGGTTGATGGGAAGAAGAACAAGGTGTATGGGCAGAATCTTTGTTATTTGGCAAAGTTATTTCTCGATCACAAGACCCTCTATTATGATGTCGACCTATTTCTGTTCTATGTTTTGTGTGAATGCGATGATCGAGGATGCCACATGGTTGGCTATTTCTCCAAGGAAAAACATTCTGAGGAATCCTACAATTTGGCATGTATCCTCACCCTTCCCCCTTACCAAAGGAAAGGCTATGGAAAATTTCTAATAGCTTTCTCATATGAACTTTCCAAAAAGGAGGGCAAAGTTGGCACACCTGAAAGACCCCTTTCCGATCTTGGACTGCTAAGTTACCGAGGATATTGGACCAGGGTTCTCTTGGACATTCTGAAAAAGCATAAAGGTAACATCTCCATCAAGGAGCTAAGTGATATGACTGCCATTAAAGCCGAAGATATATTAACAACTCTTCAGAGCCTAGAATTGATCCAATACAGGAAGGGACAACATGTTATTTGTGCAGATCCTAAGGTTCTTGATCGCCATCTTAAAGCCGCTGGTAGAGGGGGTCTCGAGGTTGATGTTAGCAAATTGATTTGGACCCCTTACAAGGAACAAAGTTGA 1338 0.4664 MGSLEAPTTTENGSTASPAGNGKSLATDGAARAPPPEMTPEKAPDSDSSKRRRSSVLPLEVGTRVMCRWRDGKYHPVKVIERRKVSSTDPNDYEYYVHYTEFNRRLDEWVKLEQLDLESVEAVVDEKVEEKGATGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCLKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYKEQS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241752g00006 445 CDD CBD_MOF_like 62 131 - -
Stsc241752g00006 445 Gene3D - 348 428 IPR036388 -
Stsc241752g00006 445 Gene3D - 170 226 - -
Stsc241752g00006 445 Pfam RNA binding activity-knot of a chromodomain 59 117 IPR025995 -
Stsc241752g00006 445 MobiDBLite consensus disorder prediction 1 22 - -
Stsc241752g00006 445 FunFam Histone acetyltransferase 168 225 - -
Stsc241752g00006 445 Pfam MOZ/SAS family 230 407 IPR002717 GO:0004402|GO:0006355|GO:0016573
Stsc241752g00006 445 PANTHER HISTONE ACETYLTRANSFERASE 61 441 - -
Stsc241752g00006 445 SMART chromo_7 73 132 IPR000953 -
Stsc241752g00006 445 FunFam Histone acetyltransferase 49 169 - -
Stsc241752g00006 445 Pfam MYST family zinc finger domain 171 225 IPR040706 -
Stsc241752g00006 445 SUPERFAMILY Chromo domain-like 52 170 IPR016197 -
Stsc241752g00006 445 FunFam Histone acetyltransferase 348 427 - -
Stsc241752g00006 445 Gene3D - 47 169 - -
Stsc241752g00006 445 CDD NAT_SF 281 339 - -
Stsc241752g00006 445 MobiDBLite consensus disorder prediction 1 57 - -
Stsc241752g00006 445 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 169 440 IPR002717 GO:0004402|GO:0006355|GO:0016573
Stsc241752g00006 445 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 170 441 IPR016181 -
Stsc241752g00006 445 Gene3D - 228 440 - -
Stsc241752g00006 445 FunFam Histone acetyltransferase 228 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241752g00006 Stsc-Chr241752 21631 25886 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241752g00006 16 445 C2H2 Transcription Factor Family AT5G64610 86.374 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241752g00006 K11308 - gmx:100819168 837.41