Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241751g00011 ATGGAAAGTGAAAGAGCATTAATGGTTGAAGTTGCAAAGGCTGCAATGGAGGAACTGGTTGTTCTTGTGAGCAGCAATGAGCCACTTTGGGAATCCATCAATTCTCCAAATAGTGCTCCAAGACTTGTTCTTATCCCTCAAATCTATGACACATTGTCTCATAGAGTTCCTATTAGGGTTTATGATAATAATCATCATCACTTCAATAATAACTCCTCCACAATGCGTGTCGAATCTTCTAGAGATTCGCGAATTGTGAAACTTCAAGCTTCGGAGCTCGTTGACGCGATTCTTAATCCTACATGTTGGACCAATATGTTCCCAATGATGATTCCGAAAGCCATAACCCTGCAAGTGCTTAAGAAAGGTACCGAAGGAAATCAACATGGAGCTTTGCAGCTGATATATGAAGAGATGCACCTTCTGTCACCTCTATTGCCACCTCGAGAATTCTTTTTGCTGCGATTCTGTCAACAACTTGAATCAAATATGTTCATAGCTGACGTGTCATATAATCACGCTAAAGAGGAAAAACCCGCTGACCAGTTTCGGGCTTGGAAGCGTCCTTCCGAATGCAAGATTGAAGCATTTATAGATTTGCTTCTTAAGAGTGGAAGCACTGCATATGGAGCAGAAAAATGGCTCATGGAAATCCAGAGAACATCTGAAAGTTATGATATCATTGCCCGGAGAAAGAAGGAATCTAATGAGAGTGTGTCAGAGAATGGTGAGTTTTGTGGGATTCTAAAGTACTCAAGCAAGAAAGAGTACAACCGAAATCCAAGTGAGCGAGTCATAGACAATGGAATTAGGTTCTCCATTTTTGACAAAACTGATGAAGAAGAAGAAGCAGCTCATCATCACACAAGTAGCAATGATAGTGATGCTGTTCTTGCTGCCTCTATTTGGCTTCCTTTTACTTCTCAACATCTCTTTAGCTTCTTCTCAGATCCAAAAACTCGTTCTCAGTGGGACTTTATTTGTTCTAGAAATCGGGTGGAAGAAGTTTCACGTTTCTCAACTGGGACTCATCCTGGCAACTATATATCACTTATGCGGCTAGTGAAGGCTGGTGCTAATAAAGCAGTGATAATTATTCAAGAAAGCTTCACAAGTTCTTGTGGATCATACATCATGTACAGTCCAATCATTGAGGAAGACTTGTACACTGCTATCCATGGCGACCGAGAAGCATCAATTTCGGTTCCCATTCGGAAAGGCCAAGGTGGTGGTGGTGGTGGTGCATTCATTATGGAACCATCTGAGGCTTCTGCTACAGAAATCATTGCCAAGATTGAGAAAATCGAGGTTGCACTTGATTGCCCTGAATCTGAATCTGATGGGGAGGATGATTCTGACGGCAATGATGATTAG 1374 0.417 MESERALMVEVAKAAMEELVVLVSSNEPLWESINSPNSAPRLVLIPQIYDTLSHRVPIRVYDNNHHHFNNNSSTMRVESSRDSRIVKLQASELVDAILNPTCWTNMFPMMIPKAITLQVLKKGTEGNQHGALQLIYEEMHLLSPLLPPREFFLLRFCQQLESNMFIADVSYNHAKEEKPADQFRAWKRPSECKIEAFIDLLLKSGSTAYGAEKWLMEIQRTSESYDIIARRKKESNESVSENGEFCGILKYSSKKEYNRNPSERVIDNGIRFSIFDKTDEEEEAAHHHTSSNDSDAVLAASIWLPFTSQHLFSFFSDPKTRSQWDFICSRNRVEEVSRFSTGTHPGNYISLMRLVKAGANKAVIIIQESFTSSCGSYIMYSPIIEEDLYTAIHGDREASISVPIRKGQGGGGGGAFIMEPSEASATEIIAKIEKIEVALDCPESESDGEDDSDGNDD 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241751g00011 457 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 4 401 IPR042160 -
Stsc241751g00011 457 Pfam START domain 11 195 IPR002913 GO:0008289
Stsc241751g00011 457 ProSiteProfiles START domain profile. 1 195 IPR002913 GO:0008289
Stsc241751g00011 457 SUPERFAMILY Bet v1-like 4 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241751g00011 Stsc-Chr241751 64006 66457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241751g00011 4 395 Homeobox Transcription Factor Family AT1G73360 30.536 2.95e-54 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241751g00011 K09338 - gmx:100794552 223.402