Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241749g00009 ATGGTGATTTTTGCCCCCAAGAAATGGGGGATTTTTGGGTTGTGGTGCTGCGTTCTCCTTCTCGCGATCTGCGCTAGGGTTTGTTCGCCAGTCAGATCCGACAAGGAAACAAGGGAGAGGTTCTACGGGAACATGCCCAACTCTACTGCCCCTGAATCCAACGATGGAACCATAGCCAAGATGTTCGATCGCGTTCTCGAGAAGGAATTCTCCGATAATGAACAACCTGAAGGAAGTGATAAGAGCAGCTTCAATAGCAGTGTAGCTGATCAACAGGCTGTGTTGGAGACTGTAGCTAAAATTACTCATGATAAAGCAAAGAAAAATGATACACATGAGGGGAATACAACAAGACCATTTCAGCTTCAAGATGTGTTCTCCCTTGAGAATGAAGATTCTGAAGATGTGACAACCTTGATTGACAAAAAGGATAATGTCTTTGTGATGTCAAACAAGAAATCCAAATATCCTGTGCTTCAGGTGGATTTGAGGCTAATATCGGATTTAGTCGTACTCATAGTTTCCGCTGCCATTGGTGGAATTATCTTTTCCTGTTTGGGACAACCGGTTATTGTGGGCTACCTTCTTGCGGGCTCCCTTATTGGACCAGGAGGTTTGAAATTCATTAGTGAAATGGTACAGGTTGAAACTGTTGCACAATTTGGAGTTGTATTTCTTCTTTTTGCTTTGGGTCTGGAGTTTTCCTTGGCAAAGTTAAAAGCTGTTGGACCTGTTGCTGTTTTAGGAGGTCTTCTTCAAATTGTTATTTTCATGGTTCTTTGTGGCATTCTTTCCAAGATATTTGGAGCCAACTTGTCTGAAGGGGTTTTCGTTGGTTCATTTCTCTCTATGTCATCAACTGCAGTGGTCATAAAGTTTTTGGTGGATCGGAATAGTAATAATTCTCTTCATGTTCAAGTTACAATTGGGACTCTTATTTTTCAGGATTGCACTGTGGGTTTACTATTTGCTCTGCTTCCAGTTTTGGGTGGCAGCAGTGGTCTTCTACAAGGAGTTGCTTCAATGGGAAAACTGTGA 1038 0.4229 MVIFAPKKWGIFGLWCCVLLLAICARVCSPVRSDKETRERFYGNMPNSTAPESNDGTIAKMFDRVLEKEFSDNEQPEGSDKSSFNSSVADQQAVLETVAKITHDKAKKNDTHEGNTTRPFQLQDVFSLENEDSEDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVLIVSAAIGGIIFSCLGQPVIVGYLLAGSLIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLAKLKAVGPVAVLGGLLQIVIFMVLCGILSKIFGANLSEGVFVGSFLSMSSTAVVIKFLVDRNSNNSLHVQVTIGTLIFQDCTVGLLFALLPVLGGSSGLLQGVASMGKL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241749g00009 345 Gene3D - 163 345 IPR038770 -
Stsc241749g00009 345 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 17 344 IPR045158 GO:0015386|GO:0071805|GO:1902600
Stsc241749g00009 345 Pfam Sodium/hydrogen exchanger family 170 331 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241749g00009 Stsc-Chr241749 42342 45618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241749g00009 32 345 Antiporters AT5G51710 82.166 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241749g00009 K26735 - gmx:100810302 566.614