Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241749g00004 ATGGAGAGTGATTCCAATGTTGTGAGGTTTGCTTTGAGGGATTGTAAATCAGTGTTTGAAGGGTTGGATTCGTTGGTTGATGTTGGTGGTGCCACTGGTAACACTGCTAAGATCATTTGTGAGGCGTTTCCAAAGCTGAAATGCGTAGTGTTGGATCTTCCACATGTTGTTGCTGGTTTGGCTGAAACTGAGAACTTAAAATTTCTTGGAGGGAACATGTTTGATTTTATCCCTCAAGCTGATGCTATTTTATTCAAGTGGGTTCTAGGGAATTGGAGTGATGATCATTGCATACAAGTGCTAAAAAAATGTAAGGAAGCAATTTCAGGCAAAGAGAGAGATTGGAAAAGACTCTTCTTGAAAGCAGGTTTCGAGAACTACAAAGTATCTCCTATATTTGGGTTTAGGTCGCTTATTGAGGTTTATCCTTAA 432 0.3958 MESDSNVVRFALRDCKSVFEGLDSLVDVGGATGNTAKIICEAFPKLKCVVLDLPHVVAGLAETENLKFLGGNMFDFIPQADAILFKWVLGNWSDDHCIQVLKKCKEAISGKERDWKRLFLKAGFENYKVSPIFGFRSLIEVYP 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241749g00004 143 Gene3D Vaccinia Virus protein VP39 1 143 IPR029063 -
Stsc241749g00004 143 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 143 IPR016461 GO:0008168
Stsc241749g00004 143 PANTHER O-METHYLTRANSFERASE 1 110 IPR016461 GO:0008168
Stsc241749g00004 143 Pfam O-methyltransferase domain 7 109 IPR001077 GO:0008171
Stsc241749g00004 143 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 142 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241749g00004 Stsc-Chr241749 14470 15077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241749g00004 1 108 Monolignol Biosynthesis Gene Families AT5G54160 40.741 3.64e-26 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241749g00004 - K22588 gmx:100819853 199.904