Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241749g00002 ATGTCTGTAGTTGCAGCACTTGTTGCAACTATAGCTTTGATATTCTTTGTAATGCAAACTAGTTTCAGAAGGTTCCATAGCAAGAAAGGAAAGCAGCACGTGATTGGGGGCACTGTGTTACACCAGTTGTTCAACTTCCATAGGCTGCATGATTTCATGGCTGATCTAGCAAGAAAAAACAAGACTTACCGGATACTCAGCCTTTTCAGGAGTGAGGTTTACACTGCAGACCCTGTAAATGTTGAGTATATCCTCAAAACAAAGTTTGCAAACTTTGGCAAGGGGTTGTACCACCATGGAATTATGACAGATCTTTTGGGTGATGGAATATTCACAGTAGACGGAGAGAAGTGGCAACATCAGAGGAAAGTGGCAACCCATGAAATCTCCACCAAAGCAGTCAAAGATTTTAGCCTTCAAGTGTTTCGATCTCATGCAGTAACACTTGCAAGAGTTGTTTCAGAGGCTGCTACATCAAATAAAGCAATTGACTTCCAGGATTTGTTTATGAAATCCACCTTAGACCAAGTGTTTAGGATCATCATTGGTGTAGACTTGGACACAATGTGCGGAACATATGAAGAAGGCACCAAATTCTCCAATGCCTTTGATGAAGCAAGTGCGATAACTCTGTACCGGTATGTTGATATTTTCTGGAAGATCAAGCGGTTCCTCAATATTGGATCGGAAGCAGTACTTAGGAGCCGTATTAAAGTTGTTGATGATTTTGTGTATGAACTTATCAGAAGCAAGATTGAGCAACTCAAAAAGCTTCAACATGGTTCACATATGGTAAAAGTAGATTTGGTGTCAAGGTTTCTGGCATTGGAAGAGAAAGATCCAAAGTACCTAAGAGACATAATCCTCAACTTCATAATTGCAGGACGAGACACAACAGCTACTACCCTTTCCTGGTTCCTTTTCTTGCTCTGCAAGCATCCTCATGTCCAAGAAAAAATTGCACATGAAGTTGGAGATATCACAAAGTTGAACAACACTTGTAATATTGAAGAAGTTACAAAAGCCCTAACTGAAGAGACTCTTCAAAAGATGAACTATTTGCATGCAGCTTTGACTGAGACACTTAGACTCTACCCTGCTGTTCCTGTGGATGGCAAACAATGTTTATCGGATGAAACTCTGCCTGATGGATTCAGTGTCAAGAGAGGTGACATGGTATCTTATGTACCATATTCCATGGGCAGGATGGAATTCCTATGGGGCAATGATGCCGAGGAATTCCATCCCGAGAGATGGCTTGATGAGAATGGAACTTTCCAACAACAGAGTTCTTTCAAGTTCACTGCCTTTCAGGCAGGACCAAGAATATGTCTAGGAAAAGATTTTGCCTATAGACAGATGAAAGTTTTTGCTGCTGTTCTTTGTCATAGCTACAAATTCAAGCTTGCTTTTGAAAACAAACAAGTTAATTATATGGTTATGCTGACTCTGCACATTGATGGTGGTCTTCATGTACATGCCTCCCATAGATAG 1494 0.407 MSVVAALVATIALIFFVMQTSFRRFHSKKGKQHVIGGTVLHQLFNFHRLHDFMADLARKNKTYRILSLFRSEVYTADPVNVEYILKTKFANFGKGLYHHGIMTDLLGDGIFTVDGEKWQHQRKVATHEISTKAVKDFSLQVFRSHAVTLARVVSEAATSNKAIDFQDLFMKSTLDQVFRIIIGVDLDTMCGTYEEGTKFSNAFDEASAITLYRYVDIFWKIKRFLNIGSEAVLRSRIKVVDDFVYELIRSKIEQLKKLQHGSHMVKVDLVSRFLALEEKDPKYLRDIILNFIIAGRDTTATTLSWFLFLLCKHPHVQEKIAHEVGDITKLNNTCNIEEVTKALTEETLQKMNYLHAALTETLRLYPAVPVDGKQCLSDETLPDGFSVKRGDMVSYVPYSMGRMEFLWGNDAEEFHPERWLDENGTFQQQSSFKFTAFQAGPRICLGKDFAYRQMKVFAAVLCHSYKFKLAFENKQVNYMVMLTLHIDGGLHVHASHR 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241749g00002 497 Gene3D Cytochrome P450 31 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241749g00002 497 Pfam Cytochrome P450 45 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241749g00002 497 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241749g00002 497 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241749g00002 497 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241749g00002 497 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241749g00002 497 PANTHER CYTOCHROME P450 16 492 - -
Stsc241749g00002 497 CDD CYP86A 61 490 - -
Stsc241749g00002 497 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241749g00002 497 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241749g00002 497 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241749g00002 497 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241749g00002 497 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241749g00002 497 SUPERFAMILY Cytochrome P450 40 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241749g00002 Stsc-Chr241749 2651 4821 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241749g00002 1 497 Cytochrome P450 AT2G45510 50.394 9.39e-175 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241749g00002 - - twl:119985375 665.611