Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241749g00001 ATGTCTGTAGTTGCAGCACTTGTTGCAACTATAGCTTTGATATTCTTTGTAATGCAAACTAGTTTCAGAAGGTTCCATAGCAAGAAAGGAAAGCAGCACGTGATTGGGGGCACTGTGTTACACCAGTTGTTCAACTTCCATAGGCTGCATGATTTCATGGCTGATCTAGCAAGAAAAAACAAGACTTACCGGATACTCAGCCTTTTCAGGAGTGAGGTTTACACTGCAGACCCTGTAAATGTTGAGTATATCCTCAAAACAAAGTTTGCAAACTTTGGCAAGGGGTTGTACCACCATGGAATTATGACAGATCTTTTGGGTGATGGAATATTCACAGTAGACGGAGAGAAGTGGCAACATCAGAGGAAAGTGGCAACCCATGAAATCTCCACCAAAGCAGTCAAAGATTTTAGCCTTCAAGTGTTTCGATCTCATGCAGTAACACTTGCAAGAGTTGTTTCAGAGGCTGCTACATCAAATAAAGCAATTGACTTCCAGGATTTGTTTATGAAATCCACCTTAGACCAAGTGTTTAGGATCATCATTGGTGTAGACTTGGACACAATGTGCGGAACATATGAAGAAGGCACCAAATTCTCCAATGCCTTTGATGAAGCAAGTGCGATAACTCTGTACCGGTATGTTGATATTTTCTGGAAGATCAAGCGGTTCCTCAATATTGGATCGGAAGCAGTACTTAGGAGCCGTATTAAAGTTGTTGATGATTTTGTGTATGAACTTATCAGAAGCAAGATTGAGCAACTCAAAAAGCTTCAACATGGTTCACATATGGTAAAAGTAGATTTGGTGTCAAGGTTTCTGGCATTGGAAGAGAAAGATCCAAAGTACCTAAGAGACATAATCCTCAACTTCATAATTGCAGGACGAGACACAACAGCTACTACCCTTTCCTGGTTCCTTTTCTTGCTCTGCAAGCATCCTCATGTCCAAGAAAAAATTGCACATGAAGTTGGAGATATCACAAAGTTGAACAACACTTGTAATATTGAAGAAGTTACAAAAGCCCTAACTGAAGAGACTCTTCAAAAGATGAACTATTTGCATGCAGCTTTGACTGAGACACTTAGACTCTACCCTGCTGTTCCTGTGGATGGCAAACAATGTTTATCGGATGAAACTCTGCCTGATGGATTCAGTGTCAAGAGAGGTGACATGGTATCTTATGTACCATATTCCATGGGCAGGATGGAATTCCTATGGGGCAATGATGCCGAGGAATTCCATCCCGAGAGATGGCTTGATGAGAATGGAACTTTCCAACAACAGAGTTCTTTCAAGTTCACTGCCTTTCAGGACCAAGAATATGTCTAG 1332 0.4114 MSVVAALVATIALIFFVMQTSFRRFHSKKGKQHVIGGTVLHQLFNFHRLHDFMADLARKNKTYRILSLFRSEVYTADPVNVEYILKTKFANFGKGLYHHGIMTDLLGDGIFTVDGEKWQHQRKVATHEISTKAVKDFSLQVFRSHAVTLARVVSEAATSNKAIDFQDLFMKSTLDQVFRIIIGVDLDTMCGTYEEGTKFSNAFDEASAITLYRYVDIFWKIKRFLNIGSEAVLRSRIKVVDDFVYELIRSKIEQLKKLQHGSHMVKVDLVSRFLALEEKDPKYLRDIILNFIIAGRDTTATTLSWFLFLLCKHPHVQEKIAHEVGDITKLNNTCNIEEVTKALTEETLQKMNYLHAALTETLRLYPAVPVDGKQCLSDETLPDGFSVKRGDMVSYVPYSMGRMEFLWGNDAEEFHPERWLDENGTFQQQSSFKFTAFQDQEYV 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241749g00001 443 Gene3D Cytochrome P450 31 439 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241749g00001 443 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241749g00001 443 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241749g00001 443 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241749g00001 443 CDD CYP86A 61 438 - -
Stsc241749g00001 443 Pfam Cytochrome P450 45 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241749g00001 443 SUPERFAMILY Cytochrome P450 40 437 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241749g00001 443 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241749g00001 443 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241749g00001 443 PANTHER CYTOCHROME P450 16 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241749g00001 Stsc-Chr241749 2651 4821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241749g00001 1 438 Cytochrome P450 AT2G45510 48.552 1.48e-143 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241749g00001 - - twl:119985375 582.408