Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc241745g00022 | ATGGCGGATCATGGTGAGGAGGGTGGTGGTGGTTTATTCAATGGGAATGTTAGTTCAGTGCTAGCTGGGATGGGTTCAGCGGTGGTTGTGCTGCTAATATACCGTTGCATGTCCATGTTTTTGTGCATCCGCAACAATAATCCTGATGAGATGAACGCAACAAGCAGCGAACAAGTAGAGGTGGCGGAATCATCTAGCAGTTTGAATAATTGGGTGTCGCATATGATCCCATCCCACAAGTACGAGAAGAAGAACGACAAGGATGATGATGATGATTGCATATGTGCAGTGTGCTTGGGAGAGTTCGAGGAGGGTGAGGAGTTGAGGAGTATGCCAGAGTGCATGCACTCTTTCCATGTCCCGTGCATTGATATGTGGCTCCGTTCCCATTCAAGTTGTCCCCTTTGCCGTGCTCATGCCACACCTTCCTCTTCTTCTTCTTCCAATAATGTTAACAACAATCACACCACCATTCATATGGATTTCATGCAACATATTCTTCTCCACCAAGCTCCCCATGCACCCTCGCTTTGA | 534 | 0.4738 | MADHGEEGGGGLFNGNVSSVLAGMGSAVVVLLIYRCMSMFLCIRNNNPDEMNATSSEQVEVAESSSSLNNWVSHMIPSHKYEKKNDKDDDDDCICAVCLGEFEEGEELRSMPECMHSFHVPCIDMWLRSHSSCPLCRAHATPSSSSSSNNVNNNHTTIHMDFMQHILLHQAPHAPSL | 177 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc241745g00022 | 177 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 22 | 141 | IPR044675 | - | |
Stsc241745g00022 | 177 | Pfam | Ring finger domain | 95 | 137 | IPR001841 | - | |
Stsc241745g00022 | 177 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 51 | 143 | IPR013083 | - | |
Stsc241745g00022 | 177 | ProSiteProfiles | Zinc finger RING-type profile. | 95 | 137 | IPR001841 | - | |
Stsc241745g00022 | 177 | SMART | ring_2 | 95 | 136 | IPR001841 | - | |
Stsc241745g00022 | 177 | SUPERFAMILY | RING/U-box | 75 | 143 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc241745g00022 | Stsc-Chr241745 | 97465 | 97998 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc241745g00022 | 21 | 149 | C3H Transcription Factor Family | AT5G17600 | 37.063 | 1.84e-21 | 87.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc241745g00022 | - | - | ahf:112782505 | 205.682 |