Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc241744g00026 | ATGGGGTGCATTTGCTCAAAACAAAAGTATAGAATTGATGGTGAACATAAGAAACAAAAAGTGCCCAACAAGAATCAGAATGGTGCATTACAAATTGAAATTGTTGCACCTTCAGTCTCAACTACTACCTTTCCTAATCCACAATCAAGTGGCCTTCATGGTTTAATGGTGCCTCAATTGGCCAAATCATATGCACAAATGGCTATGCCAGCAATATTAGAAGATAAAACCAACCACTTATTGTTGGATACTGCACAACAAAAGCAACAAAAAAGACAGCAGCACCAGAGATGTAAAACAGTAGGAAGTGGTGAAAATGGAGTACTAGCTGAAAGAAAATCAGTTCTGAGAAGAATACTCAGCGTGTCGCATATCTCCGGTGAGAACGTTGATGCCGGATGGCCGACTTGGTTATCTTCTGTGGCCGGAGAAGCCATCAAAGGGTGGCTTCCTCGACGAGCAGACTCCTTCGAAAAATTAGAGCAAATTGGACAAGGGGCTTATAGCAGTGTTCATAAAGCACTTGACCTTGAAACTGGTAAATTTGTGGCTCTCAAAAAGGTTAGATTCTTGAGCAGTGATCCGGCAAGCGTTCGATTCATGGCGAGGGAAATCCATATATTAAGGCAACTAGATCATCCCAATGTGATCAAGCTTGAAGGTCTTGTTGCATCTAGAACTTCCACCAGCTTGTACCTTGTTTTTGAATACATGGAGCATGATCTTGCTGGATTAGCATCCACTCCTGGAATCAAGTTCACTGAATCACAGATTAAGTGCTTTATGCAGCAACTACTTAGGGGGCTTGAGCACTGCCATAGTCGCGGTGTGCTGCACCGCGACATCAAGGGTTCCAATCTTCTAATTGACAACAATGGAAACCTTAAGATAGGAGATTTTGGTCTTGCAACTGTTTATGATCCTGCCAAGAGTCAGCAATTAACCAGCCGTGTGGTGACTCTGTGGTACAGGGCACCTGAGCTTTTGTTAGGTGCTACAGATTATGGAGCTGCAATAGATATGTGGAGTGCTGGTTGTATTCTAGCTGAATTGCTGCTAGGGAAGCCTATTATGCCTGGAAGAACAGAGGTGGAACAAATGCACAAGATTTTTAAGCTTTGTGGTTCCCCATCTGAAGAATATTGGCAGAGAACAAAGTTTCCCCATGCTACTAGTTTCAAACCACAACAGACTTATGAACGCCAACTTGCCAAAACATTTAGAAAGGTCTCTCCTTCAGCACTAGCCCTTGTTGATAAGCTCCTGTCTATGGAACCACAAGATCGAGGATCTGCGGCTTGCGCGCTTCAAAACGAGTTCTTCACTACAGAACCCCTACCATGTGATCCATCAAGTTTACCAAAGTTTTCACCAACCAAGGAGTTCGACGCCAGGAATCGAAACAAGGAAGTAACAACGAAAAACACTGAAGCTGCAAGAGGAAGAGGACTGGTATCTGAATTGTTGGATGCAGGACAAGATAAAAAACTACCTAGAACGCCAGAATATAACACCCAAGGAGATCTAACATTGAGGGGGAAACCAAATGTTGAGGCTCACTATAAAGTTGATCCAAGTAGATCAGTGTGCAATCCAAGTTATGTACATAGTGCAACAATGGGGAATGCAGAAGTTTCAAAACTCCAGATATTGGAGTCATCTGCTGCCAAAACTCCAGAGTTGCGGACACAAAAGTCTCAGATGAGTCGAGCCACAGCAGATTTCTCCAACTATTCAAGTAAATGGGAACAAGGAGGCATGCCTCGTCATCAAGAACCCTCGATGGGGGGCTATGTGCAAAAGAAAAGTAGGATCCACTGCTCAGGACCTTTGATCCAGGGTGGGAATATCGATGATATGCTGAGAGAACATGAGAAGCTAATGCAAGAGGCTTTCCGCACAGTCAAGATCACCAATTCTAGAAACTAA | 1929 | 0.4355 | MGCICSKQKYRIDGEHKKQKVPNKNQNGALQIEIVAPSVSTTTFPNPQSSGLHGLMVPQLAKSYAQMAMPAILEDKTNHLLLDTAQQKQQKRQQHQRCKTVGSGENGVLAERKSVLRRILSVSHISGENVDAGWPTWLSSVAGEAIKGWLPRRADSFEKLEQIGQGAYSSVHKALDLETGKFVALKKVRFLSSDPASVRFMAREIHILRQLDHPNVIKLEGLVASRTSTSLYLVFEYMEHDLAGLASTPGIKFTESQIKCFMQQLLRGLEHCHSRGVLHRDIKGSNLLIDNNGNLKIGDFGLATVYDPAKSQQLTSRVVTLWYRAPELLLGATDYGAAIDMWSAGCILAELLLGKPIMPGRTEVEQMHKIFKLCGSPSEEYWQRTKFPHATSFKPQQTYERQLAKTFRKVSPSALALVDKLLSMEPQDRGSAACALQNEFFTTEPLPCDPSSLPKFSPTKEFDARNRNKEVTTKNTEAARGRGLVSELLDAGQDKKLPRTPEYNTQGDLTLRGKPNVEAHYKVDPSRSVCNPSYVHSATMGNAEVSKLQILESSAAKTPELRTQKSQMSRATADFSNYSSKWEQGGMPRHQEPSMGGYVQKKSRIHCSGPLIQGGNIDDMLREHEKLMQEAFRTVKITNSRN | 642 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc241744g00026 | 642 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 277 | 289 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc241744g00026 | 642 | Gene3D | Phosphorylase Kinase; domain 1 | 144 | 239 | - | - | |
Stsc241744g00026 | 642 | Pfam | Protein kinase domain | 157 | 441 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc241744g00026 | 642 | SUPERFAMILY | Protein kinase-like (PK-like) | 151 | 449 | IPR011009 | - | |
Stsc241744g00026 | 642 | FunFam | probable serine/threonine-protein kinase At1g54610 | 144 | 239 | - | - | |
Stsc241744g00026 | 642 | ProSiteProfiles | Protein kinase domain profile. | 157 | 441 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc241744g00026 | 642 | PANTHER | CELL DIVISION PROTEIN KINASE | 155 | 447 | - | - | |
Stsc241744g00026 | 642 | CDD | STKc_CDK9_like | 157 | 441 | - | - | |
Stsc241744g00026 | 642 | Gene3D | Transferase(Phosphotransferase) domain 1 | 240 | 480 | - | - | |
Stsc241744g00026 | 642 | SMART | serkin_6 | 157 | 441 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc241744g00026 | 642 | FunFam | probable serine/threonine-protein kinase At1g54610 | 240 | 481 | - | - | |
Stsc241744g00026 | 642 | ProSitePatterns | Protein kinases ATP-binding region signature. | 163 | 186 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc241744g00026 | Stsc-Chr241744 | 120023 | 122793 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc241744g00026 | 149 | 531 | Core Cell Cycle Gene Families | AT5G10270 | 46.734 | 3.01e-115 | 352 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-CRK7-CDK9 | Stsc241744g00026 | Pkinase | 5.2e-72 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc241744g00026 | K08819 | - | gmx:100817858 | 751.895 |