Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241744g00012 ATGGCCACGCTACTCTCCCACACCTCAATCTTCCCTATTTTCAATTTACACACACAGAAACCGCTTCTTCGCTCCTCCATCTCTCGTTTCCCTCTTACTATCAGATGCCAATCTGTTAACACCGAGAAGCAGCGAAAATCTAACAGAAACCTGTTAGACAATGCTAGCAACCTGCTTACTAACTTCCTCAGTGGTGGAAGCATAGGATCCATGCCAATTGCTGAAGGTGCTGTCACCGATCTATTTGGTCGACCTCTCTTTTTTTCGCTATACGATTGGTTCTTGGAGCACGGCTCTGTTTACAAACTTGCGTTCGGGCCCAAAGCATTTGTTGTTGTATCGGATCCCATAGTTGCAAGACATATTCTGCGAGAAAATGCATTTTCTTATGACAAGGGAGTACTTGCTGATATTCTAGAGCCAATAATGGGCAAAGGACTCATACCTGCGGACCTTGATACTTGGAAGCAAAGAAGAAGAGTTATTGCTCCAGGTTTCCATGCGTCGTACTTGGAAGCCATGGTCAAAATATTCAGAACTTGCTCAGAAAGAACAATATCAAAAATCAATCAGCTTCTTGAACAAGAGGGCAATGTTGGACAGAAGTTGATTGAATTAGATCTCGAGGCGGAGTTTTCTAATTTGGCTCTTGACATTATTGGACTTGGTGTGTTCAACTATGACTTTGGTTCTGTCACCAAAGAATCTCCTGTTATTAAGGCAGTCTATGGCACTCTTTTTGAAGCAGAGCATAGGTCCACTTTCTACATTCCATATTGGAAAGTTCCATTGGCAACATTTATAGTCCCGAGGCAAAGGAAGTTTCAAAGTGACCTCAAGATCATCAATGCTTGTCTTGATGAACTTATCCAAAACGCAAAAGAGAGCAGAGAGGAAACAGATGTTGAGAAACTGCAGCAAAGGGACTACTTAAATTTGAAGGATGCAAGTCTTCTGCGTTTCTTGGTTGATATGCGGGGAGCTGATGTTGATGATCGTCAGTTGAGGGATGATTTAATGACAATGCTTATTGCTGGTCATGAGACAACAGCTGCAGTTCTTACTTGGGCAACTTTCCTTCTATCTCAAAACCCTGACAAAATGAGGAAGGCTCAAGCAGAGGTAGATTCGGTGCTGGGTACGGGGACCCCAACTTACGAATCACTTAAAAAATTGCAGTACATTAGACTTATTGTTGTGGAGTCTCTCCGTTTGTATCCTCAACCACCTTTGCTGATTAGGCGTTCACTCAAACCCGATGTTTTACCAGGAGGCTACAAAGGTGATAAGGATGGTTATGCAATTCCTGCCGGGACTGACGTCTTCCTCTCTATATATAATATGCATAGATCTCCATATTTTTGGGAGCGTCCTGATGAATTTGAACCAGAGAGGTTTCTGGTGCAAAGAACGAACGAACAAATTGAAGGATGGGCTGGTTTTGACCCATCTAGAAGCCCTGGAGCCTTGTACCCAAACGAGATAATATCGGATTTTGCATTCTTGCCTTTTGGTGGTGGACCACGAAAATGCGTTGGGGACCAATTTGCTCTGATGGAGTCGACTGTAGCGTTGGCTATGCTGCTACAGAACTTTGATGTGCAATTGAAGGGGACCCCCGATTCGGTTGAGCTAGTTACCGGGGCAACTATCCATACCAAAAATGGATTGTGGTGCAAAATGACTAAGAGATCTAGTTTCCACTCAACTTAA 1713 0.4343 MATLLSHTSIFPIFNLHTQKPLLRSSISRFPLTIRCQSVNTEKQRKSNRNLLDNASNLLTNFLSGGSIGSMPIAEGAVTDLFGRPLFFSLYDWFLEHGSVYKLAFGPKAFVVVSDPIVARHILRENAFSYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHASYLEAMVKIFRTCSERTISKINQLLEQEGNVGQKLIELDLEAEFSNLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKVPLATFIVPRQRKFQSDLKIINACLDELIQNAKESREETDVEKLQQRDYLNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWATFLLSQNPDKMRKAQAEVDSVLGTGTPTYESLKKLQYIRLIVVESLRLYPQPPLLIRRSLKPDVLPGGYKGDKDGYAIPAGTDVFLSIYNMHRSPYFWERPDEFEPERFLVQRTNEQIEGWAGFDPSRSPGALYPNEIISDFAFLPFGGGPRKCVGDQFALMESTVALAMLLQNFDVQLKGTPDSVELVTGATIHTKNGLWCKMTKRSSFHST 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241744g00012 570 Gene3D Cytochrome P450 70 569 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241744g00012 570 SUPERFAMILY Cytochrome P450 81 564 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241744g00012 570 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 504 513 IPR017972 GO:0005506|GO:0016705
Stsc241744g00012 570 PRINTS E-class P450 group I signature 354 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241744g00012 570 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241744g00012 570 PRINTS E-class P450 group I signature 511 534 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241744g00012 570 PRINTS E-class P450 group I signature 501 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241744g00012 570 PRINTS E-class P450 group I signature 334 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241744g00012 570 Pfam Cytochrome P450 94 557 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241744g00012 570 Coils Coil 279 299 - -
Stsc241744g00012 570 CDD CYP97 88 558 - -
Stsc241744g00012 570 PRINTS P450 superfamily signature 511 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241744g00012 570 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241744g00012 570 PRINTS P450 superfamily signature 345 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241744g00012 570 PRINTS P450 superfamily signature 502 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241744g00012 570 PANTHER CYTOCHROME P450 FAMILY 4 96 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241744g00012 Stsc-Chr241744 47619 52797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241744g00012 29 565 Cytochrome P450 AT4G15110 78.439 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241744g00012 K24543 - gmx:606504 959.518