Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241743g00022 ATGGCTGAGGAACTTGATAAGCCTCTGCTCGACCCCGAGAATTTCAACCGAGATGGTATTGATTTGGAGCGCATACCATTGGAAGAAGTATTTCAACAGCTGAGAACATCGCGAACCGGACTCTCGTCGGACGATGCTGAAGCCCGGCTGCAGATATTTGGCCCCAACAAACTTGAAGAGAGGAAAGAGAATAAAATATTGAAATTTCTAAGTTTTATGTGGAATCCTCTGTCATGGGTTATGGAAGCAGCAGCATTGATGGCAATTATCCTTGCTAATGGTGGAGGGGAAGGTCCTGATTGGCAAGACTTTGTAGGAATTCTATGCCTACTGGTAATAAACTCGACCATAAGTTTCATAGAAGAAAATAATGCTGGTAATGCTGCATCAGCACTAATGGCTCGTTTAGCTCCTAAAACAAAGGTTCTAAGAGATGGGCAGTGGCAAGAGCAAGATGCAGCTATATTAGTACCTGGAGACATAATCAGCATAAAGCTAGGAGATATCGTTCCGGCCGATGCTCGATTGCTTGAAGGGGACCCTCTAAAAATTGACCAGGCAAGTCAAGAAATCTAA 576 0.4392 MAEELDKPLLDPENFNRDGIDLERIPLEEVFQQLRTSRTGLSSDDAEARLQIFGPNKLEERKENKILKFLSFMWNPLSWVMEAAALMAIILANGGGEGPDWQDFVGILCLLVINSTISFIEENNAGNAASALMARLAPKTKVLRDGQWQEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQASQEI 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241743g00022 191 SMART Cation_ATPase_N_a_2 21 93 IPR004014 -
Stsc241743g00022 191 SUPERFAMILY Calcium ATPase, transmembrane domain M 20 144 IPR023298 -
Stsc241743g00022 191 PANTHER CALCIUM-TRANSPORTING ATPASE 24 188 - -
Stsc241743g00022 191 Pfam E1-E2 ATPase 136 187 - -
Stsc241743g00022 191 Gene3D - 138 188 - -
Stsc241743g00022 191 Pfam Cation transporter/ATPase, N-terminus 25 87 IPR004014 -
Stsc241743g00022 191 Gene3D - 100 137 - -
Stsc241743g00022 191 SUPERFAMILY Calcium ATPase, transduction domain A 138 187 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241743g00022 Stsc-Chr241743 90348 91339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241743g00022 13 188 Primary Pumps ATPases AT2G07560 78.409 2.82e-83 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241743g00022 K01535 - gmx:100795836 355.14