Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241743g00020 ATGACCATATCTAAAGACAGAGTGAAGCCATCTCCTACACCTGATAGTTGGAAGCTGCCAGAGATATTTGCCACAGGAATTGTCATTGGCACGTACCTTGCTTTGACTCATTTCCATGTAGCCTCCTTATCCAGCGACAGTGAGAAAGTTGCATCTGCTGTATATTTGCAAGTTAGCATCATCAGCCAGGCTTTAATTTTTGTGACTCGCAGCCGCGGCTGGTCATTCCTAGAGAGACCAGGAGTTCTACTAATGTGTGCCTTTGTAATAGCTCAACTGGTAGCCACCTTGATTGCTGTCTATGCACACATCAGTTTTGCTTATATCAGAGGAATTGGATGGAAGTGGGCTGGTGTTATATGGTTATATAGTTTAGTGTTCTATGTGCCTTTGGACATCATTAAGTTCATAGTGCGCTATGCTTTGAGTGGTGAAGCCTGGAATCTGGTATTTGACAGAAAGACTGCTTTTACATCAAAGAAAGACTATGGCACGGAAGACAGGGCTGCAAAGTGGGTTCTTTCTCAGAGGAGTCTCCAAGGACTCATGGCCGTGGACCTTGGTTCCAATGAGAGGAGATCTTCTTTGATTGCTGAACAAGCCAAGCGTCGTGCCGAAATTGCCAGACTGGGGGAATTGCACACTCTGAGAGGACATGTAGAGTCTGTTGTGAGACTCAAAAAGTTAGACGTGAATATGATCCAATCAGCTCACACAGTCTAA 723 0.4481 MTISKDRVKPSPTPDSWKLPEIFATGIVIGTYLALTHFHVASLSSDSEKVASAVYLQVSIISQALIFVTRSRGWSFLERPGVLLMCAFVIAQLVATLIAVYAHISFAYIRGIGWKWAGVIWLYSLVFYVPLDIIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGTEDRAAKWVLSQRSLQGLMAVDLGSNERRSSLIAEQAKRRAEIARLGELHTLRGHVESVVRLKKLDVNMIQSAHTV 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241743g00020 240 Gene3D - 1 141 - -
Stsc241743g00020 240 SUPERFAMILY Calcium ATPase, transmembrane domain M 3 142 IPR023298 -
Stsc241743g00020 240 PANTHER CALCIUM-TRANSPORTING ATPASE 1 177 - -
Stsc241743g00020 240 Gene3D - 192 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241743g00020 Stsc-Chr241743 86391 87655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241743g00020 1 240 Primary Pumps ATPases AT1G17260 65.625 8.26e-111 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241743g00020 K01535 - pop:18094657 406.757