Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241743g00019 ATGGTGGTAGAAGACGGTACAGCAAGGGTGCTGCTTCTGCTCTTGTTCTTTACCAGTAACTGCATTCTTCTTTGGATGCCCATTCCTGTCAATGGAAACACAGATCCAAATGATGCGGCTGCTATAAGGATTTTATTTCAATCTATGAACTCGCCTTCCCAGCTAGGTTGGCAAGCAAATGGTGATGATCCGTGTGGACAAAATTGGAAAGGCATAACATGCTCAAACAACCGAGTTACAGAGATTAAGTTATCTAATCTTGCACTCACGGGAACGGTGCCTTATGGATTACAACCCTTGACATCTTTGACCAACATAGACCTGAGTAGCAACAATCTTGGAGGTGGCTTACCATACCAGCTTCCTCCCAATATGCAGCGCTTAAATCTGGCTCATAATAACTTTACTGGGACAATCCCTTACTCTTTTTCTCAGATGACCTCTCTCACAGACCTGAATCTTGCTCACAATCAGTTCCAGCAAGGATTGAACGTTGACTTTCAAAGTCTTTCTGCCCTCTCTTCATTGGATGTCTCTTTCAATTTATTGACAGGTGACCTTCCACAGACTTTGAGCTCACTTTCAGGCATTACCAGCATGTATCTGCAGAACAACCAGTTTACAGGCACTATAGATGTCCTTGCTAATCTGCCACTTGAAAATCTGAATGTTGAAAACAATAATTTTACTGGATGGATACCAGAACAGTTGAAAAGCATAAATTTAAAGACTGGTGGTAATTCATGGAGCACCGGACCTGCGCCCCCACCTCCTCCTGGGACCCCACCATTACCTAAAAGCAATCGGCACCACAGAGCTGTTGGTGGAAGCACCTCTACCACCTCCTCAGATGCTGGCAGTAGCAGCAACACTGGTGACAAAAGCAAAAAATCTGGTATTGGAGGTGGTGGCATAGCTGGAATTGTGATCTCGTTAATTGTTGTTGGGGCAATATTAGCATTCTTTTTGGTGAAGAAAAAAACCAAGAAGTCATCTTCAGATTTAGAAAAACAGGACAATCAATCCTTTGCTCCTCTTCCCTCAAATGAATCCCACGAATTGAAATCTGTGCCACCTTCCTCTATAACTGAAATGAAGACATTTGATACTTCTGCCTCAATAAATCTTAAACCCCCACCTATGGATCGGCATAAATCATTTGATGAGGATGAACTTTCAAAGAAGCCTGTCATTGTCAAGAAGACTGTAACAACTGCTGCTAATGTGAAATCATACTCTATAGCTGATCTGCAGATTTCAACAGGAAGCTTCAGTACTGATCACCTTGTTGGTGAGGGGTCCTTTGGACGTGTTTACCGGGCTCAATTCGATGATGGAAAGGTTCTTGCAGTGAAGAAAATAGATTCATCTGTCCTTCCCAGTGACCTTTCTGAAGAATTTACAGAAATAGTTTCAAACATCTCCCAGTTACATCATCCAAACGTGACAGAACTTGTAGGTTATTGCTCAGAGTATGGGCAACACCTCTTAGTCTATGAGTTTCATAGAAATGGATCTCTGCATGACTTCCTTCACCTATCAGATGAATACAGTAAGCCATTGATATGGAACTCCCGTGTGAAGATAGCCTTGGGGACTGCGCGTGCTTTAGAGTACCTACATGAAGTTTGTTCACCATCAGTTGTGCACATGAATATTAAATCAGCCAACATACTGCTTGATGCAGAGCTTAATCCTCATCTTTCGGACAGTGGATTGGCAAGCTATATTCCAAACGCAGACCAGGTGTTGAATCAAAATGCTGGATCTGGATACGATGCGCCTGAAGTTGCTTTGTCTGGTCAGTATACCATGAAAAGTGATGTCTACTGCTTTGGAGTTGTGATGTTGGAGCTTCTCACTGGACGTACACCATTTGATAGCTCAAGACCAAGACCTGAGCAGTCTCTAGTTCGTTGGGCAGCACCTCAACTCCATGACATTGATGCATTGACTAAAATGGTTGACCCTGCGCTGAAAGGGTTATATCCTGTTAAATCTTTGTCTCGATTTGCGGATGTTATTGCTCTGTGCGTTCAGCTGGAGCCTGAATTCCGACCACCAATGTCAGAAGTGGTTCAAGCATTAGTACTGTTGGTTCAGCGAGCTAACCTGAGCAGACGAACTACTTTTGGATCTGATCATGGAGGATCCCATCGAGGGAGTGATGAACCCGCCATACATGATGTGTAA 2193 0.4341 MVVEDGTARVLLLLLFFTSNCILLWMPIPVNGNTDPNDAAAIRILFQSMNSPSQLGWQANGDDPCGQNWKGITCSNNRVTEIKLSNLALTGTVPYGLQPLTSLTNIDLSSNNLGGGLPYQLPPNMQRLNLAHNNFTGTIPYSFSQMTSLTDLNLAHNQFQQGLNVDFQSLSALSSLDVSFNLLTGDLPQTLSSLSGITSMYLQNNQFTGTIDVLANLPLENLNVENNNFTGWIPEQLKSINLKTGGNSWSTGPAPPPPPGTPPLPKSNRHHRAVGGSTSTTSSDAGSSSNTGDKSKKSGIGGGGIAGIVISLIVVGAILAFFLVKKKTKKSSSDLEKQDNQSFAPLPSNESHELKSVPPSSITEMKTFDTSASINLKPPPMDRHKSFDEDELSKKPVIVKKTVTTAANVKSYSIADLQISTGSFSTDHLVGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPSDLSEEFTEIVSNISQLHHPNVTELVGYCSEYGQHLLVYEFHRNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHMNIKSANILLDAELNPHLSDSGLASYIPNADQVLNQNAGSGYDAPEVALSGQYTMKSDVYCFGVVMLELLTGRTPFDSSRPRPEQSLVRWAAPQLHDIDALTKMVDPALKGLYPVKSLSRFADVIALCVQLEPEFRPPMSEVVQALVLLVQRANLSRRTTFGSDHGGSHRGSDEPAIHDV 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241743g00019 730 ProSitePatterns Protein kinases ATP-binding region signature. 430 453 IPR017441 GO:0005524
Stsc241743g00019 730 MobiDBLite consensus disorder prediction 251 265 - -
Stsc241743g00019 730 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 147 697 IPR046959 -
Stsc241743g00019 730 MobiDBLite consensus disorder prediction 337 362 - -
Stsc241743g00019 730 MobiDBLite consensus disorder prediction 709 730 - -
Stsc241743g00019 730 MobiDBLite consensus disorder prediction 244 299 - -
Stsc241743g00019 730 SUPERFAMILY Protein kinase-like (PK-like) 407 697 IPR011009 -
Stsc241743g00019 730 Gene3D Ribonuclease Inhibitor 187 251 IPR032675 -
Stsc241743g00019 730 MobiDBLite consensus disorder prediction 370 389 - -
Stsc241743g00019 730 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Stsc241743g00019 730 CDD STKc_IRAK 430 696 - -
Stsc241743g00019 730 Pfam Leucine rich repeat 123 183 IPR001611 GO:0005515
Stsc241743g00019 730 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 502 710 - -
Stsc241743g00019 730 Gene3D Ribonuclease Inhibitor 38 186 IPR032675 -
Stsc241743g00019 730 MobiDBLite consensus disorder prediction 272 296 - -
Stsc241743g00019 730 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 35 260 - -
Stsc241743g00019 730 SUPERFAMILY L domain-like 34 238 - -
Stsc241743g00019 730 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 388 501 - -
Stsc241743g00019 730 ProSiteProfiles Protein kinase domain profile. 424 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241743g00019 730 Pfam Protein tyrosine and serine/threonine kinase 427 696 IPR001245 GO:0004672|GO:0006468
Stsc241743g00019 730 Gene3D Phosphorylase Kinase; domain 1 386 501 - -
Stsc241743g00019 730 MobiDBLite consensus disorder prediction 330 362 - -
Stsc241743g00019 730 MobiDBLite consensus disorder prediction 713 730 - -
Stsc241743g00019 730 Gene3D Transferase(Phosphotransferase) domain 1 503 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241743g00019 Stsc-Chr241743 78571 84499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241743g00019 21 709 Strubbelig Receptor Gene Family AT1G53730 66.810 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Stsc241743g00019 PK_Tyr_Ser-Thr 9.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241743g00019 - - gmx:100807707 1110.52