Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241740g00027 ATGGATAGCATTGCACAAGCTCACTTGGATTCGCTTCTCGCGAAAAACGAGACTCAAGTTGCGGCAGACCCTTTGGTGAAGAGGTATACCTTGTTGTTGGCTCATCGTTTGTTCGTGAGCATTGAAGATGAGAAGCACATTGCAAGCATTGAGAAACATTATAATGCTTTGGGGTCTGGACTTATAAATTTGCCCATTGACCTGCCCGGAACCCCCTTCAACAAATCAATCAAAGCTTCCAAGTTCATCCGAAAACAACTTGTGGACATTATACGGCAGAGGAAGGTTGATCTGTCTCAAGGAAATAATAATGCTTCCCCGAAACAGGACATATTATCCAACATGCTTTTGATATGTGACATGGATGAATGGCAAATAGCTGATCAACTGCTTGGAATTTTGTTTGGATGCTATGACACTATCAGTACGACTTGCACTTTAATTATCAAATACCTTTCCCAGTTTCCTCACATGTATCACAGAGTCTATCAGGCACCTGGAGGATTCAGGGAAGCCATCGATGACTTTACCTTCAACGGATTCTCAATTCCAAAAGGATGGAAGTTGTTTTGGAGTGCAAATTCAACACATAAGAGTGAGAAGTACTTTCCAGAGCCAGAGAAAGTCGATCCAAGTAGATTCGAAGGAAATGGACCGGCTCCTTGCACATTTGTGCCATTTGGTGGTGGGCCTAGGATTTGTCCAGGAAACGAGTATGCCAGGCTAGTAATAATGGTGTTCTTGCACAATTTGGTAAAACGCTTCAAATGGCAAGCCTTGAATCCGAATGAGAACATCGTTGTTGATCCTTTCCCTGTGCCTGCAAATCATCTACCAATTCGTCTTTATCCTCATCACAAAGATGACTAG 870 0.4276 MDSIAQAHLDSLLAKNETQVAADPLVKRYTLLLAHRLFVSIEDEKHIASIEKHYNALGSGLINLPIDLPGTPFNKSIKASKFIRKQLVDIIRQRKVDLSQGNNNASPKQDILSNMLLICDMDEWQIADQLLGILFGCYDTISTTCTLIIKYLSQFPHMYHRVYQAPGGFREAIDDFTFNGFSIPKGWKLFWSANSTHKSEKYFPEPEKVDPSRFEGNGPAPCTFVPFGGGPRICPGNEYARLVIMVFLHNLVKRFKWQALNPNENIVVDPFPVPANHLPIRLYPHHKDD 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241740g00027 289 Gene3D Cytochrome P450 1 164 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241740g00027 289 Gene3D Cytochrome P450 165 284 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241740g00027 289 PRINTS E-class P450 group I signature 234 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241740g00027 289 PRINTS E-class P450 group I signature 192 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241740g00027 289 PRINTS E-class P450 group I signature 224 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241740g00027 289 PANTHER CYTOCHROME P450 26 1 164 - -
Stsc241740g00027 289 SUPERFAMILY Cytochrome P450 2 284 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241740g00027 289 Pfam Cytochrome P450 169 261 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241740g00027 289 Pfam Cytochrome P450 68 164 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241740g00027 289 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 227 236 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241740g00027 Stsc-Chr241740 122650 123828 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241740g00027 1 189 Cytochrome P450 AT5G36110 38.865 1.24e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241740g00027 K20667 - gmx:100801007 375.941