Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241740g00026 ATGGGCTACCCCATTATGGGGGAGACGCTCGAGTTTTTGTCCACCGGGTGGAAAGGACACCCGGAGAAGTTTGTGTTTGACCGCACCGTGAAGTATTCGTCGGAATTCTTCAAGACATCGCTGTTAGGGGAACCCACGGTTGTGTTGGGTGGTGCTGCCGGTAACAAGTTCTTGTTCTCCAATGAGAACAACCTGGTGAGGCTATGGATGCCTGACAATGTGCACAAGTTGTTTCCGTCGTCGTTTCATCAGACAGGGTCGTCTAATGGAGAAGCTGCGAAGAAGGTTAGAAACATGCTTCCCCAGTTCATAAAGCCTCAAGCACTCCAACGTTACGTTTCCATTGTTGACTCCATCGCTAAGAGCCACTTTGCTTCCCTTTGGGAACACCACATTCAAGTCGCTGTATACCCTTTAGTCAAGAGTATCTCAAGAAAGCATTTGAATAATGTTGTGTGCGGTGAGGAATGTGGTAGGTACACGTTGTTGTTGGCATATCGACTGTTTGTAAGCATTGAGGATGAGAAGCACGTAACAAAGCTGGCAAAGTATTTCAAGCATATGGGGTCAGGGCTGATATCGTTGCCGATTGACTTTCCCGGAACTAACTTCAACAAAGCAATCAGAGCATGCAAATCCATAAGGAAGGAGCTTATAGAGATCATAAGGCAGAGGAAGGTGGATCTAAGTGAAGGGAATGCGTCCCCATCACAAGACATATTGTCTCACATGTTGTTCATGTCCACCAATGATAATAATAATGGAAACTATACGAGTGATGAATTGTTAATTGCTGATCAGATACTTGGACTCTTGTTTGGAAGCTATGACACTGTTAGTTCTACATGCACTTTAATTGTCAAATACCTTGCCGAATTCCCTCACATATATGATAGAGTCTATCAAGAGCAAATGGAAATAGGAAAATCAAAAAGCGAAGGAGATTTGTTGAATTGGAATGACATCAACAAGATGAGATACTCATGGAACGTAGCTTGTGAAGCTATGAGAATGACTCCTATAGCTCCTGGAGGTTTCAGGGAAGCCATCAATGACTTTACTTTCAATGGCTTCTCAATTCCAAAAGGATGGAAGTTGTTTTGGAGTGCAAATTCAACACACAAGAGTGAAAAGTATTTCCCGGAGGCAGAGAAATTTGATCCAAGTAGATTTGAAGGAGAAGGACCAGCACCATTCACGTTTGTGCCATTCGGAGGAGGACCAAGAATGTGCCCAGGAAACGAGTATGCACGCCTAGTAATCATGGTTTTCCTCCACAATTTGGTCAAACGCTTCAAATGGCAAATGTTGATTCCTCATGAGAAATTTTTCAGTGATCCATTCCCCATGCCTACACACAACCTCCCAGTTCGCCTTTATCCTCATAAACCCTAA 1395 0.4373 MGYPIMGETLEFLSTGWKGHPEKFVFDRTVKYSSEFFKTSLLGEPTVVLGGAAGNKFLFSNENNLVRLWMPDNVHKLFPSSFHQTGSSNGEAAKKVRNMLPQFIKPQALQRYVSIVDSIAKSHFASLWEHHIQVAVYPLVKSISRKHLNNVVCGEECGRYTLLLAYRLFVSIEDEKHVTKLAKYFKHMGSGLISLPIDFPGTNFNKAIRACKSIRKELIEIIRQRKVDLSEGNASPSQDILSHMLFMSTNDNNNGNYTSDELLIADQILGLLFGSYDTVSSTCTLIVKYLAEFPHIYDRVYQEQMEIGKSKSEGDLLNWNDINKMRYSWNVACEAMRMTPIAPGGFREAINDFTFNGFSIPKGWKLFWSANSTHKSEKYFPEAEKFDPSRFEGEGPAPFTFVPFGGGPRMCPGNEYARLVIMVFLHNLVKRFKWQMLIPHEKFFSDPFPMPTHNLPVRLYPHKP 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241740g00026 464 CDD CYP90-like 28 461 - -
Stsc241740g00026 464 PRINTS P450 superfamily signature 402 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241740g00026 464 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241740g00026 464 PRINTS P450 superfamily signature 411 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241740g00026 464 PRINTS P450 superfamily signature 330 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241740g00026 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 404 413 IPR017972 GO:0005506|GO:0016705
Stsc241740g00026 464 FunFam Taxadiene 5-alpha hydroxylase 1 462 - -
Stsc241740g00026 464 Gene3D Cytochrome P450 1 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241740g00026 464 PANTHER CYTOCHROME P450 26 1 449 - -
Stsc241740g00026 464 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241740g00026 464 PRINTS E-class P450 group I signature 401 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241740g00026 464 PRINTS E-class P450 group I signature 411 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241740g00026 464 PRINTS E-class P450 group I signature 369 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241740g00026 464 SUPERFAMILY Cytochrome P450 2 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241740g00026 464 Pfam Cytochrome P450 3 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241740g00026 Stsc-Chr241740 119029 121002 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241740g00026 2 366 Cytochrome P450 AT5G36110 50.543 6.15e-116 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241740g00026 K20667 - gmx:100801007 635.18