LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc241740g00013	ATGATCATGGGATACGGTGTGGGGGAAGAGAATAAGCCTGCATGGTTGGAAGCACTATACAGAGAGAAGTTCTTTGTGGGATGTTCATACCATGAGAAGGCAAAGAAGAATGAGAAGAACGTCTGCTGCTTGGATTGCTGCATAAGCATATGTCCACACTGCTTCCCTTCTCATCGCTTCCACCGCCTTCTTCAGGTCCGCCGCTACGTCTACCACGACGTCGTCCGATTAGAAGATCTTCAGAAACTCATTGACTGCTCCAACGTCCAGCCTTACACCATTAACAGCGCCAAAGTTGTCTTCATCAAGAACCGCCCTCAAAACCGCCAATTCAAAGGCTCTGGTAATTACTGCACTTCCTGTGACCGTACCCTCCAAGAGCCTTTCATCCATTGCTCTCTTTCATGCAAGGTGGATTTTGTGCTGAAACACTATAAGGATCTATCACCATACCTAAGGACATGCAAGACCCTACAGCTAGGACCAGACTTCCTGATCCCACAATTTCAGGACATGGGGGAGGATGAGATGACAACAACTGGAGGATCTTCATCAACAATTGTGGACAGTGATGAGCCAATGAGTTCTTGTTATTCATGGGGTTCATCATCAGGATCAGAGAACATGGGTTGCAGCAGTGAGAAGATAGTGAGGAAGAAGAGGAGTGGATGGAATGTGTGTGCAAGGCTAATCACAAATTCATCAAGCAATAGCAACAAGGTTTCTGATGAAGATATGGCAACAAGTATCAGCAGAAGAAAAGGCATTCCTCATAGATCTCCTCTATGTTAA	792	0.4583	MIMGYGVGEENKPAWLEALYREKFFVGCSYHEKAKKNEKNVCCLDCCISICPHCFPSHRFHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKNRPQNRQFKGSGNYCTSCDRTLQEPFIHCSLSCKVDFVLKHYKDLSPYLRTCKTLQLGPDFLIPQFQDMGEDEMTTTGGSSSTIVDSDEPMSSCYSWGSSSGSENMGCSSEKIVRKKRSGWNVCARLITNSSSNSNKVSDEDMATSISRRKGIPHRSPLC	263

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc241740g00013	263	PANTHER	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	8	262	-	-
	Stsc241740g00013	263	MobiDBLite	consensus disorder prediction	236	263	-	-
	Stsc241740g00013	263	Pfam	PLATZ transcription factor	67	138	IPR006734	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc241740g00013	Stsc-Chr241740	53330	54628	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	PLATZ	Stsc241740g00013		PLATZ	3.1e-26	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc241740g00013	-		-	gmx:100810461	415.616